Lens_culinaris_v1_Contig509

Contig Overview
NameLens_culinaris_v1_Contig509
Unique NameLens_culinaris_v1_Contig509
Typecontig
OrganismLens culinaris (lentil)
Sequence length782
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GT621591GT621591Lens culinarisEST
GT623347GT623347Lens culinarisEST


Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GT621591ESTGT621591:244..559 +
GT623347ESTGT623347:1..782 +
Homology
BLAST of Lens_culinaris_v1_Contig509 vs. TrEMBL
Match: B9R6Z1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1587270 PE=4 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 3.259e-39
Identity = 108/238 (45.38%), Postives = 128/238 (53.78%), Query Frame = 1
Query:   31 MIKTLSPYPNPAKTAEIMSRYRPIAPKPETCXXXXXXXXXXXXXXXXXQKIKQSPYLRNLWPQLQARPTRTRKRGRAPISLPSSLKRQKTHVLGFWQPLHGTSPMKNLSLQGNSFGXXXXXXXXXXXNHGIGVLNCNHHLEKTPNSNLNLVTXXXXXXXXXXXXXXXXXXXASKFDLE-----VIDLNKTKGEVPQEIDLLQQLQKPAXXXXXXXXXXXAPQPVRPIGSCISVGCINE 729
            MIKTLSPY   AKTAEIMSRYRPIAPKPE                   QKI QSPYLRNLWPQLQARPTRTRKRGRA IS P ++KR +THVLG     H  SP ++LSLQG + G                ++  +  L     +N +LVT                        +E     +IDLN T  E+P+E D LQQLQ+P            APQP+RP+GS ISVGC++E
Sbjct:    1 MIKTLSPYSTTAKTAEIMSRYRPIAPKPE------GPSNSFGESSSMSQKISQSPYLRNLWPQLQARPTRTRKRGRAAIS-PPTIKRPRTHVLGLSSTSHVISPARHLSLQGFAHGLSQLSVP--------SLVGVSSSLNNPVTTNSDLVTLSLLPCQPPVPVVDNQVTAPEISCMEARRQVIIDLN-TVAEIPEEKDFLQQLQEP------PTNNVIAPQPIRPVGSSISVGCVSE 216          
BLAST of Lens_culinaris_v1_Contig509 vs. TrEMBL
Match: B9GNN8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_551773 PE=4 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.335e-37
Identity = 107/238 (44.96%), Postives = 127/238 (53.36%), Query Frame = 1
Query:   31 MIKTLSPYPNPAKTAEIMSRYRPIAPKPETCXXXXXXXXXXXXXXXXXQKIKQSPYLRNLWPQLQARPTRTRKRGRAPISLPSSLKRQKTHVLGFWQPLHGTSPMKNLSLQGNSFGXXXXXXXXXXXNHGIGVLNCNHHLEKTPNSNLNLVTXXXXXXXXXXXXXXXXXXXASKFDLE-----VIDLNKTKGEVPQEIDLLQQLQKPAXXXXXXXXXXXAPQPVRPIGSCISVGCINE 729
            MIKTLSP  N AKTAEIMSRYRPIAP+PE                   QKI++SPYLR LWPQ+QARPTRTRKRGRA +S P ++KR +TH+LG   P H TSP K+LSLQG   G                ++  N  LE +   + NLVT                        +E     VIDLN T  E P+E DLLQQLQ P            APQP+R +GS IS+ CI+E
Sbjct:    1 MIKTLSPCSNTAKTAEIMSRYRPIAPRPE------GSASSMDESSSMSQKIRESPYLRTLWPQMQARPTRTRKRGRAVVS-PPNIKRPRTHLLGLSSPSHVTSPAKHLSLQGFVHGIPQLPVP--------NLVGVNSGLENSVTMSSNLVTLPLLQSPTTVTVVANQAAVPELSCMEPNRDKVIDLN-TVAEFPEEKDLLQQLQVP------PTNNVIAPQPLRLVGSSISIACISE 216          
BLAST of Lens_culinaris_v1_Contig509 vs. TrEMBL
Match: B9IBQ6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572029 PE=4 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.266e-31
Identity = 101/236 (42.80%), Postives = 120/236 (50.85%), Query Frame = 1
Query:   31 MIKTLSPYPNPAKTAEIMSRYRPIAPKPETCXXXXXXXXXXXXXXXXXQKIKQSPYLRNLWPQLQARPTRTRKRGRAPISLPSSLKRQKTHVLGFWQPLHGTSPMKNLSLQGNSFGXXXXXXXXXXXNHGIGVLNCNHHLEKTPNSN---LNLVTXXXXXXXXXXXXXXXXXXXASKFDLEVIDLNKTKGEVPQEIDLLQQLQKPAXXXXXXXXXXXAPQPVRPIGSCISVGCINE 729
            MIKTLSP  N AKTAEIMSRYRPIAPKPE                   +     P+LR LWPQ+ ARPTRTRKRGRA +S P ++KR +TH+LG   P H T   K+LSLQG + G              +G+ NC      T +SN   L L+                        D +VIDLN T  E  +E D LQQLQ+P+           APQPVRP+ S ISV  INE
Sbjct:    1 MIKTLSPCSNTAKTAEIMSRYRPIAPKPE---------------GSTDESPSMPPFLRTLWPQMHARPTRTRKRGRAAVS-PLTIKRPRTHLLGLSSPSHATYSAKHLSLQGFAHGITQLPVPNL-----VGI-NCGMENSVTVSSNLVTLPLLQSPTVPVVENQAAAPELSCQEPNRD-KVIDLN-TVAETSEERDPLQQLQEPS------TSNVIAPQPVRPVCSSISVASINE 206          
BLAST of Lens_culinaris_v1_Contig509 vs. TrEMBL
Match: A5BYE4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013936 PE=4 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.284e-27
Identity = 97/235 (41.28%), Postives = 122/235 (51.91%), Query Frame = 1
Query:   31 MIKTLSPYPNPAKTAEIMSRYRPIAPKPETCXXXXXXXXXXXXXXXXXQKIKQSPYLRNLWPQLQARPTRTRKRGRAPISLPSSLKRQKTHVLGFWQPLHGTSPMKNLSLQGNSFGXXXXXXXXXXXNHGIGVLNC-NHHLEKTPNSNLNLVTXXXXXXXXXXXXXXXXXXXASKFDLEVIDLNKTKGEVPQEIDLLQQLQK-PAXXXXXXXXXXXAPQPVRPIGSCISVGCINE 729
            MI+TL+PY + AKTAEIMSRYRPIAPKPE                   QK+++SPYLRNLWPQLQARPTR+RKRGR   S P++LKR +TH++GF   L  T P  +  L G   G X            + +L C    L   PN + N +                       FDL   + +     +P+E DLLQQLQ+ PA           +PQPVRPIGS ISV C+ +
Sbjct:    1 MIRTLNPYNSTAKTAEIMSRYRPIAPKPEP------PVNPMFERPSMSQKMRESPYLRNLWPQLQARPTRSRKRGRPGFS-PAALKRPRTHLVGF---LFQTRPQASPRLNG---GFXRAISTTADGLMTLPLLPCPPPQLPVVPN-DFNCLNPCGGNV---------------XFDL---NTSVVXARIPEEKDLLQQLQRAPA-----NTTNVISPQPVRPIGSSISVRCMRD 198          
BLAST of Lens_culinaris_v1_Contig509 vs. TrEMBL
Match: Q1G322_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At1g27461 PE=4 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.746e-19
Identity = 92/241 (38.17%), Postives = 110/241 (45.64%), Query Frame = 1
Query:   31 MIKTLSPYPNPA-----KTAEIMSRYRPIAPKPETCXXXXXXXXXXXXXXXXXQKIKQSPYLRNLWPQLQARPTRTRKRGRAPISLPSSL--KRQKTHVLGFWQPLHGTSPMKNLSLQGNSFGXXXXXXXXXXXNHGIGVL-NCNHHLEKTPNSNLNLVTXXXXXXXXXXXXXXXXXXXASKFDLEVIDLNKTKGEVPQEIDLLQQLQKP-AXXXXXXXXXXXAPQPVRPIGSCISVGCIN 726
            MIK L+P+ + +     KTAEI+S+YRPIAPKP T                   KI QSPYLRNLWPQLQARPTRTRKRGR  +  PSSL  KR K+          G+S    +S Q    G           +H +  L    +  E   +S   LVT                          VIDLNKT  EV QE D L QLQ P             +PQP+RP+ S I+V  IN
Sbjct:    1 MIKILNPHSHHSQTTTLKTAEILSKYRPIAPKPGT-----PRVNDDDPSSSMSHKISQSPYLRNLWPQLQARPTRTRKRGRGGMG-PSSLAMKRPKSSC--------GSSSTSTISTQ-RVLGPIKTLSFQAFTHHRLPNLPQVGYGFENGVSS--TLVTLPLLQCSPPSSKCMEPEIKGK----GVIDLNKT-AEVIQERDFLTQLQGPITTTTTATTSRVISPQPIRPVCSKINVAYIN 219          
BLAST of Lens_culinaris_v1_Contig509 vs. TrEMBL
Match: A0MDN5_ARATH (Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.746e-19
Identity = 92/241 (38.17%), Postives = 110/241 (45.64%), Query Frame = 1
Query:   31 MIKTLSPYPNPA-----KTAEIMSRYRPIAPKPETCXXXXXXXXXXXXXXXXXQKIKQSPYLRNLWPQLQARPTRTRKRGRAPISLPSSL--KRQKTHVLGFWQPLHGTSPMKNLSLQGNSFGXXXXXXXXXXXNHGIGVL-NCNHHLEKTPNSNLNLVTXXXXXXXXXXXXXXXXXXXASKFDLEVIDLNKTKGEVPQEIDLLQQLQKP-AXXXXXXXXXXXAPQPVRPIGSCISVGCIN 726
            MIK L+P+ + +     KTAEI+S+YRPIAPKP T                   KI QSPYLRNLWPQLQARPTRTRKRGR  +  PSSL  KR K+          G+S    +S Q    G           +H +  L    +  E   +S   LVT                          VIDLNKT  EV QE D L QLQ P             +PQP+RP+ S I+V  IN
Sbjct:    1 MIKILNPHSHHSQTTTLKTAEILSKYRPIAPKPGT-----PRVNDDDPSSSMSHKISQSPYLRNLWPQLQARPTRTRKRGRGGMG-PSSLAMKRPKSSC--------GSSSTSTISTQ-RVLGPIKTLSFQAFTHHRLPNLPQVGYGFENGVSS--TLVTLPLLQCSPPSSKCMEPEIKGK----GVIDLNKT-AEVIQERDFLTQLQGPITTTTTATTSRVISPQPIRPVCSKINVAYIN 219          
BLAST of Lens_culinaris_v1_Contig509 vs. TrEMBL
Match: D7KBQ6_ARALY (F17L21.26 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_313471 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.056e-13
Identity = 77/212 (36.32%), Postives = 92/212 (43.40%), Query Frame = 1
Query:   97 PIAPKPETCXXXXXXXXXXXXXXXXXQKIKQSPYLRNLWPQLQARPTRTRKRGRAPISLPSSLKRQKTHVLGFWQPLHGTSPMKNLSLQGNSFGXXXXXXXXXXXNHGI-GVLNCNHHLEKTPNSNLNLVTXXXXXXXXXXXXXXXXXXXASKFDLEVIDLNKTKGEVPQEIDLLQQLQKP-AXXXXXXXXXXXAPQPVRPIGSCISVGCIN 726
            PIAPKP T                   KI QSPYLRNLWPQLQARPTRTRKRGR  +  PSSL  ++       + L G+SP    S Q    G           +HG+  +    + L+   +S   LVT                          VIDLNKT  EV QE D L QLQ P             +PQ +RP+ S I+V  IN
Sbjct:  713 PIAPKPGT-----PRVNDDDPSSSMSHKISQSPYLRNLWPQLQARPTRTRKRGRGGMG-PSSLAMKRP------KSLCGSSPTSTNSTQ-RVLGPIKTLPFQAFTHHGLPNLAQVGYALDNGGSS--ALVTLPLLQCYPPPSKCMEPEIKGK----GVIDLNKT-AEVIQERDFLTQLQGPITTPTTATTSRVISPQAIRPVCSKINVAYIN 904          
BLAST of Lens_culinaris_v1_Contig509 vs. TrEMBL
Match: Q9FZI9_ARATH (F17L21.26 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.379e-13
Identity = 80/215 (37.21%), Postives = 92/215 (42.79%), Query Frame = 1
Query:   94 RPIAPKPETCXXXXXXXXXXXXXXXXXQKIKQSPYLRNLWPQLQARPTRTRKRGRAPISLPSSL--KRQKTHVLGFWQPLHGTSPMKNLSLQGNSFGXXXXXXXXXXXNHGIGVL-NCNHHLEKTPNSNLNLVTXXXXXXXXXXXXXXXXXXXASKFDLEVIDLNKTKGEVPQEIDLLQQLQKP-AXXXXXXXXXXXAPQPVRPIGSCISVGCIN 726
            RPIAPKP T                   KI QSPYLRNLWPQLQARPTRTRKRGR  +  PSSL  KR K+          G+S    +S Q    G           +H +  L    +  E   +S   LVT                          VIDLNKT  EV QE D L QLQ P             +PQP+RP+ S I+V  IN
Sbjct:  707 RPIAPKPGT-----PRVNDDDPSSSMSHKISQSPYLRNLWPQLQARPTRTRKRGRGGMG-PSSLAMKRPKSSC--------GSSSTSTISTQ-RVLGPIKTLSFQAFTHHRLPNLPQVGYGFENGVSS--TLVTLPLLQCSPPSSKCMEPEIKGK----GVIDLNKT-AEVIQERDFLTQLQGPITTTTTATTSRVISPQPIRPVCSKINVAYIN 899          
BLAST of Lens_culinaris_v1_Contig509 vs. TAIR peptide
Match: AT1G27461.1 (| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:9537948-9539012 REVERSE LENGTH=354)

HSP 1 Score: 99.3673 bits (246), Expect = 2.425e-21
Identity = 92/241 (38.17%), Postives = 110/241 (45.64%), Query Frame = 1
Query:   31 MIKTLSPYPNPA-----KTAEIMSRYRPIAPKPETCXXXXXXXXXXXXXXXXXQKIKQSPYLRNLWPQLQARPTRTRKRGRAPISLPSSL--KRQKTHVLGFWQPLHGTSPMKNLSLQGNSFGXXXXXXXXXXXNHGIGVL-NCNHHLEKTPNSNLNLVTXXXXXXXXXXXXXXXXXXXASKFDLEVIDLNKTKGEVPQEIDLLQQLQKP-AXXXXXXXXXXXAPQPVRPIGSCISVGCIN 726
            MIK L+P+ + +     KTAEI+S+YRPIAPKP T                   KI QSPYLRNLWPQLQARPTRTRKRGR  +  PSSL  KR K+          G+S    +S Q    G           +H +  L    +  E   +S   LVT                          VIDLNKT  EV QE D L QLQ P             +PQP+RP+ S I+V  IN
Sbjct:    1 MIKILNPHSHHSQTTTLKTAEILSKYRPIAPKPGT-----PRVNDDDPSSSMSHKISQSPYLRNLWPQLQARPTRTRKRGRGGMG-PSSLAMKRPKSSC--------GSSSTSTISTQ-RVLGPIKTLSFQAFTHHRLPNLPQVGYGFENGVSS--TLVTLPLLQCSPPSSKCMEPEIKGK----GVIDLNKT-AEVIQERDFLTQLQGPITTTTTATTSRVISPQPIRPVCSKINVAYIN 219          
The following BLAST results are available for this feature:
BLAST of Lens_culinaris_v1_Contig509 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
B9R6Z1_RICCO3.259e-3945.38Putative uncharacterized protein OS=Ricinus commun... [more]
B9GNN8_POPTR2.335e-3744.96Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9IBQ6_POPTR4.266e-3142.80Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5BYE4_VITVI1.284e-2741.28Putative uncharacterized protein OS=Vitis vinifera... [more]
Q1G322_ARATH3.746e-1938.17Putative uncharacterized protein OS=Arabidopsis th... [more]
A0MDN5_ARATH3.746e-1938.17Putative uncharacterized protein (Fragment) OS=Ara... [more]
D7KBQ6_ARALY1.056e-1336.32F17L21.26 OS=Arabidopsis lyrata subsp. lyrata GN=A... [more]
Q9FZI9_ARATH1.379e-1337.21F17L21.26 OS=Arabidopsis thaliana PE=4 SV=1[more]
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BLAST of Lens_culinaris_v1_Contig509 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G27461.12.425e-2138.17| Symbols: | unknown protein; Has 30201 Blast hit... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 37..53
score: NAcoord: 122..132
score: NAcoord: 158..176
score: NAcoord: 209..219
score: NAcoord: 240..251
score
NoneNo IPR availableSEGsegsegcoord: 9..22
score: NAcoord: 46..65
score
NoneNo IPR availableSEGsegsegcoord: 38..48
score

Sequences
The following sequences are available for this feature:

contig sequence

>Lens_culinaris_v1_Contig509 ID=Lens_culinaris_v1_Contig509; Name=Lens_culinaris_v1_Contig509; organism=Lens culinaris; type=contig; length=782bp
CAAATTTTAAGGTAACATAGTACAATAGCCATGATCAAAACATTAAGTCC
TTACCCAAATCCTGCTAAAACAGCTGAGATTATGTCGAGATATAGACCTA
TAGCACCAAAGCCAGAAACATGTTCGAGTAACAATTCAATGAGTGATGGA
TCTTCTTCCTCTAACTCACTTTCTCAAAAAATCAAACAATCTCCTTATCT
TAGGAATCTTTGGCCACAGTTACAAGCAAGACCAACAAGGACAAGAAAAC
GAGGTAGAGCTCCTATTTCACTACCTTCTTCTTTGAAGAGACAGAAAACA
CACGTCTTAGGTTTTTGGCAACCTTTGCATGGAACATCTCCAATGAAAAA
CCTATCTTTACAAGGGAATAGTTTTGGTCCTCCTAGTTCACTTCCTCAAC
TTCCTCTCCCTAATCATGGAATTGGAGTTCTCAATTGCAACCACCATTTG
GAGAAAACTCCAAATAGTAATCTTAATTTGGTTACACTCCCTCTTCTTCC
ATGGTCTCCTAATTCTCCTAATTCATCACCTCATCATAATAATGCGTCAA
AATTTGATCTAGAGGTGATAGATTTGAACAAAACCAAAGGTGAAGTTCCA
CAAGAGATAGACCTCTTGCAACAGCTTCAAAAACCAGCTTCTAGCTCCTC
CAACAATGTCATCAATGTCATCGCGCCGCAACCGGTTCGACCGATAGGCT
CATGCATTAGTGTTGGTTGCATTAATGAAGTTTCATCTACTACACCATCT
TTGACACAACAAACACCTAAGAAATCAGAAGA
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