Lens_culinaris_v1_Contig513

Contig Overview


Name	Lens_culinaris_v1_Contig513
Unique Name	Lens_culinaris_v1_Contig513
Type	contig
Organism	Lens culinaris (lentil)
Sequence length	1063

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	contig

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GT626506	GT626506	Lens culinaris	EST
GT623995	GT623995	Lens culinaris	EST
GT620739	GT620739	Lens culinaris	EST
GT620642	GT620642	Lens culinaris	EST
GT621203	GT621203	Lens culinaris	EST
GT625089	GT625089	Lens culinaris	EST
GT620021	GT620021	Lens culinaris	EST
GT626704	GT626704	Lens culinaris	EST
GT620514	GT620514	Lens culinaris	EST
GT620533	GT620533	Lens culinaris	EST
GT618698	GT618698	Lens culinaris	EST
GT619571	GT619571	Lens culinaris	EST
GT621433	GT621433	Lens culinaris	EST

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GT626506	EST	GT626506:35..414 +
GT623995	EST	GT623995:30..517 -
GT620739	EST	GT620739:1..566 -
GT620642	EST	GT620642:4..546 -
GT621203	EST	GT621203:4..561 -
GT625089	EST	GT625089:542..959 +
GT620021	EST	GT620021:715..946 +
GT626704	EST	GT626704:545..959 +
GT620514	EST	GT620514:231..1011 -
GT620533	EST	GT620533:549..985 +
GT618698	EST	GT618698:542..1063 +
GT619571	EST	GT619571:883..1061 -
GT621433	EST	GT621433:547..1037 +

Homology

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. SwissProt
Match: RS212_ARATH (40S ribosomal protein S21-2 OS=Arabidopsis thaliana GN=RPS21C PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 3.297e-35
Identity = 67/81 (82.72%), Postives = 75/81 (92.59%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            MQNEEGQ+TELYIPRKCSATNRLIT+KDHASVQ+N+GHLD +G+Y G F+TFALCGF RAQGDADSG+DRLWQKKK E KQ
Sbjct:    1 MQNEEGQVTELYIPRKCSATNRLITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQ 81

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. SwissProt
Match: RS211_ARATH (40S ribosomal protein S21-1 OS=Arabidopsis thaliana GN=RPS21B PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.385e-33
Identity = 63/81 (77.78%), Postives = 74/81 (91.36%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            M+N+ GQ+TELYIPRKCSATNR+IT+KDHASVQ+N+GHLD +G+Y G F+TFALCGF RAQGDADSG+DRLWQKKK E KQ
Sbjct:    1 MENDAGQVTELYIPRKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQ 81

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. SwissProt
Match: RS21_MAIZE (40S ribosomal protein S21 OS=Zea mays GN=RPS21 PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 5.263e-33
Identity = 63/81 (77.78%), Postives = 74/81 (91.36%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            MQNEEG+  +LY+PRKCSATNR+ITAKDHASVQIN+GHLD +G+Y+GHF+TFAL GF RAQGDADS +DRLWQKKK E+KQ
Sbjct:    1 MQNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHLDANGLYDGHFTTFALSGFVRAQGDADSSLDRLWQKKKAEIKQ 81

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. SwissProt
Match: RS21_ORYSJ (40S ribosomal protein S21 OS=Oryza sativa subsp. japonica GN=RPS21 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.531e-32
Identity = 62/81 (76.54%), Postives = 75/81 (92.59%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            MQNEEGQ+ +LY+PRKCSATNR+ITAKDHASVQIN+GH+DE+G+Y+G F+TFAL GF RAQGDADS +DRLWQK+K E+KQ
Sbjct:    1 MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEVKQ 81

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. SwissProt
Match: RS21_CYAPA (40S ribosomal protein S21 OS=Cyanophora paradoxa GN=RPS21 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.876e-22
Identity = 49/75 (65.33%), Postives = 64/75 (85.33%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLD-ESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQK 823
            MQN+EG+I +LYIPRKCSATNRLI+A DHA+VQINVGH+D  SG+Y G ++TFALCGF R+ G++D+ ++RL  K
Sbjct:    1 MQNDEGKIVDLYIPRKCSATNRLISATDHAAVQINVGHVDPNSGLYTGDYTTFALCGFVRSMGESDAALNRLCVK 75

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. SwissProt
Match: RS21_ASPFU (40S ribosomal protein S21 OS=Aspergillus fumigatus GN=rps21 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.674e-20
Identity = 42/74 (56.76%), Postives = 60/74 (81.08%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQK 823
            M+NE+G+I +LY+PRKCSATNR+I A DHASVQI++  +DE+G Y G   ++ALCGF RA+G++D  ++RL Q+
Sbjct:    1 MENEKGEIVDLYVPRKCSATNRIIKANDHASVQISIAKVDENGRYTGENQSYALCGFIRARGESDDSLNRLCQR 74

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. SwissProt
Match: RS21_DICDI (40S ribosomal protein S21 OS=Dictyostelium discoideum GN=rps21 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.312e-19
Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 2

Query:  629 ELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKK 826
            ELY PRKCSATNRLITAKDHASVQIN+GH++  G+YNG  + FA CGF R  G +D+ ++RL Q+K
Sbjct:    7 ELYTPRKCSATNRLITAKDHASVQINIGHVNAEGIYNGEQTIFAFCGFLRNNGQSDAALNRLAQQK 72

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. SwissProt
Match: RS21_ASHGO (40S ribosomal protein S21 OS=Ashbya gossypii GN=RPS21 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.259e-18
Identity = 43/75 (57.33%), Postives = 59/75 (78.67%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESG-VYNGHFSTFALCGFTRAQGDADSGIDRLWQK 823
            M+N++GQ+ ELY+PRKCSATNR+I AKDH SVQIN+  +DE+G    G + T+AL G+ RA+G+AD  ++RL QK
Sbjct:    1 MENDKGQLVELYVPRKCSATNRIIKAKDHGSVQINIAQVDENGHAVPGEYITYALSGYVRARGEADDSMNRLAQK 75

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. SwissProt
Match: RS21_KLULA (40S ribosomal protein S21 OS=Kluyveromyces lactis GN=RPS21 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.662e-18
Identity = 42/75 (56.00%), Postives = 59/75 (78.67%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESG-VYNGHFSTFALCGFTRAQGDADSGIDRLWQK 823
            M+N++GQ+ ELY+PRKCSATNR+I AKDH+SVQIN+  +DE G    G + T+AL G+ RA+G+AD  ++RL Q+
Sbjct:    1 MENDKGQLVELYVPRKCSATNRIIKAKDHSSVQINIAQVDEEGRAIPGEYVTYALSGYIRARGEADDSLNRLAQQ 75

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. SwissProt
Match: RS21B_YEAST (40S ribosomal protein S21-B OS=Saccharomyces cerevisiae GN=RPS21B PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.049e-17
Identity = 41/74 (55.41%), Postives = 57/74 (77.03%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESG-VYNGHFSTFALCGFTRAQGDADSGIDRLWQ 820
            M+N++GQ+ ELY+PRKCSATNR+I A DHASVQINV  +DE G    G + T+AL G+ R++G++D  ++RL Q
Sbjct:    1 MENDKGQLVELYVPRKCSATNRIIKADDHASVQINVAKVDEEGRAIPGEYITYALSGYVRSRGESDDSLNRLAQ 74

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TrEMBL
Match: Q2HVJ1_MEDTR (Ribosomal protein S21e OS=Medicago truncatula GN=MtrDRAFT_AC148817g44v2 PE=4 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 2.622e-41
Identity = 84/101 (83.17%), Postives = 91/101 (90.10%), Query Frame = 2

Query:  542 GCLVFLVYFCQSDFTKKRLKMQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            G +   + FC+ D +++ LKMQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNG FSTFALCGFTRAQGDADSGIDRLWQKKK E+KQ
Sbjct:    7 GIIYTYILFCECD-SEETLKMQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGQFSTFALCGFTRAQGDADSGIDRLWQKKKAEIKQ 106

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TrEMBL
Match: B7FGU9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.102e-39
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            MQNEEGQITELYIPRKCSATNRLITAKDHASVQ+N+GHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ
Sbjct:    1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQLNIGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 81

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TrEMBL
Match: Q7XA95_TRIPR (Ultraviolet-B-repressible protein OS=Trifolium pratense PE=4 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.031e-37
Identity = 92/118 (77.97%), Postives = 99/118 (83.90%), Query Frame = -1

Query:  164 MASTSIISMIVPVTSAATKKLESPTSHAFLKTPLTLRPSSKSNGRFQ--VKASLKEKVVTGXXXXXXXAQMVIPDVAEAATVSPSLKNFLLSIVSGGVVVTAILGAVIGVSNFDPVKR 511
            MASTSIISM VPVT A++KK+E+P S AFLK PLTL+PS KSN RFQ  VKASLKEKVVTG       A M++PDVAEAATVSPSLKNFLLSIVSGGVVV AILGAVI VSNFDPVKR
Sbjct:    1 MASTSIISMSVPVTCASSKKIEAPISQAFLKAPLTLKPS-KSNTRFQFQVKASLKEKVVTGLTAAALTASMIVPDVAEAATVSPSLKNFLLSIVSGGVVVAAILGAVIAVSNFDPVKR 117

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TrEMBL
Match: B7FH97_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 5.117e-37
Identity = 91/118 (77.12%), Postives = 98/118 (83.05%), Query Frame = -1

Query:  161 MASTSIISMIVPVTSAATKKLESPTSHAFLKTPLTLRPS-SKSNGRFQVKASLKEKVVTGXXXXXXXAQMVIPDVAEAATVSPSLKNFLLSIVSGGVVVTAILGAVIGVSNFDPVKRG 511
            MASTS ISM VP+T  A+KKLE+PTS AFLK PLTL+PS S +  RF VKASLKEK+VTG       A M+ PDVAEAATVSPSLKNFLLSIVSGGVVVTAILGAVIGVSNFDPVKRG
Sbjct:    1 MASTSTISMAVPLT-CASKKLEAPTSQAFLKAPLTLKPSKSVAAARFVVKASLKEKIVTGLTAAALTASMISPDVAEAATVSPSLKNFLLSIVSGGVVVTAILGAVIGVSNFDPVKRG 117

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TrEMBL
Match: C6SWG4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.140e-36
Identity = 73/81 (90.12%), Postives = 78/81 (96.30%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            MQNEEGQITELYIPRKCSATNRLITAKDHASVQIN+GH+DE+GVYNGHFSTFALCGF RAQGDADS +DRLWQKKK E+KQ
Sbjct:    1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHVDENGVYNGHFSTFALCGFIRAQGDADSALDRLWQKKKVEVKQ 81

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TrEMBL
Match: C6SYE0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.489e-36
Identity = 72/81 (88.89%), Postives = 78/81 (96.30%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            MQNEEGQITELYIPRKCSATNRLITAKDHASVQ+N+GH+DE+GVYNGHFSTFALCGF RAQGDADS +DRLWQKKK E+KQ
Sbjct:    1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQVNIGHVDENGVYNGHFSTFALCGFIRAQGDADSALDRLWQKKKVEVKQ 81

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TrEMBL
Match: C6T6P9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.067e-34
Identity = 72/81 (88.89%), Postives = 77/81 (95.06%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            MQNEEGQITELYIPRKCSATNRLITAKDHASVQIN+GH+DE+GVYNGHFSTFALCGF RAQGDADS +DRLWQ KK E+KQ
Sbjct:    1 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHVDENGVYNGHFSTFALCGFIRAQGDADSALDRLWQ-KKVEVKQ 80

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TrEMBL
Match: D7M5J1_ARALY (40S ribosomal protein S21 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_910813 PE=4 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 6.916e-34
Identity = 68/81 (83.95%), Postives = 74/81 (91.36%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            MQNEEGQ TELYIPRKCSATNRLIT+KDHASVQ+N+GHLD +GVY G F+TFALCGF RAQGDADSG+DRLWQKKK E KQ
Sbjct:    1 MQNEEGQTTELYIPRKCSATNRLITSKDHASVQLNIGHLDANGVYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQ 81

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TrEMBL
Match: D7LUN3_ARALY (40S ribosomal protein S21 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_323927 PE=4 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.180e-33
Identity = 67/81 (82.72%), Postives = 75/81 (92.59%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            M+NEEG+ITELYIPRKCSATNRLIT+KDHASVQ+N+GHLD +GVY G F+TFALCGF RAQGDADSG+DRLWQKKK E KQ
Sbjct:    1 MENEEGKITELYIPRKCSATNRLITSKDHASVQLNIGHLDANGVYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQ 81

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TrEMBL
Match: A5B0Z2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033219 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.304e-32
Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            MQNEEGQ  +LYIPRKCSATNRLIT+KDHASVQINVGHLDESG Y G F+TFALCGF RAQGDADS +DRLWQKKK E++Q
Sbjct:    1 MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQINVGHLDESGTYTGQFTTFALCGFVRAQGDADSALDRLWQKKKAEVRQ 81

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TAIR peptide
Match: AT5G27700.1 (| Symbols: | Ribosomal protein S21e | chr5:9807541-9808048 REVERSE LENGTH=82)

HSP 1 Score: 149.443 bits (376), Expect = 3.160e-36
Identity = 67/81 (82.72%), Postives = 75/81 (92.59%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            MQNEEGQ+TELYIPRKCSATNRLIT+KDHASVQ+N+GHLD +G+Y G F+TFALCGF RAQGDADSG+DRLWQKKK E KQ
Sbjct:    1 MQNEEGQVTELYIPRKCSATNRLITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQ 81

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TAIR peptide
Match: AT3G53890.2 (| Symbols: | Ribosomal protein S21e | chr3:19955582-19956049 REVERSE LENGTH=82)

HSP 1 Score: 144.05 bits (362), Expect = 1.328e-34
Identity = 63/81 (77.78%), Postives = 74/81 (91.36%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            M+N+ GQ+TELYIPRKCSATNR+IT+KDHASVQ+N+GHLD +G+Y G F+TFALCGF RAQGDADSG+DRLWQKKK E KQ
Sbjct:    1 MENDAGQVTELYIPRKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQ 81

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TAIR peptide
Match: AT3G53890.1 (| Symbols: | Ribosomal protein S21e | chr3:19955582-19956049 REVERSE LENGTH=82)

HSP 1 Score: 144.05 bits (362), Expect = 1.328e-34
Identity = 63/81 (77.78%), Postives = 74/81 (91.36%), Query Frame = 2

Query:  602 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGFTRAQGDADSGIDRLWQKKKTELKQ 844
            M+N+ GQ+TELYIPRKCSATNR+IT+KDHASVQ+N+GHLD +G+Y G F+TFALCGF RAQGDADSG+DRLWQKKK E KQ
Sbjct:    1 MENDAGQVTELYIPRKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQ 81

[Close]

BLAST of Lens_culinaris_v1_Contig513 vs. TAIR peptide
Match: AT2G06520.1 (| Symbols: PSBX | photosystem II subunit X | chr2:2587868-2588218 REVERSE LENGTH=116)

HSP 1 Score: 97.4413 bits (241), Expect = 1.425e-20
Identity = 64/124 (51.61%), Postives = 78/124 (62.90%), Query Frame = -1

Query:  164 MASTSIISMIVPVTSAATKKLESPTSHAFLKTPLTLRPSSK---SNGR---FQVKASLKEKVVTGXXXXXXXAQMVIPDVAEAAT--VSPSLKNFLLSIVSGGVVVTAILGAVIGVSNFDPVKR 511
            MASTS +S++ P        L    S  FLK PL L+PS     + GR    QVKA   +K +TG       A MVIP++AEAA   +SPSLKNFLLSI SGG+V+T I+G V+GVSNFDPVKR
Sbjct:    1 MASTSAMSLVTP--------LNQTRSSPFLK-PLPLKPSKALVATGGRAQRLQVKALKMDKALTGISAAALTASMVIPEIAEAAGSGISPSLKNFLLSIASGGLVLTVIIGVVVGVSNFDPVKR 115

The following BLAST results are available for this feature:

BLAST of Lens_culinaris_v1_Contig513 vs. SwissProt
BLAST of Lens_culinaris_v1_Contig513 vs. TrEMBL
BLAST of Lens_culinaris_v1_Contig513 vs. TAIR peptide

BLAST of Lens_culinaris_v1_Contig513 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS212_ARATH	3.297e-35	82.72	40S ribosomal protein S21-2 OS=Arabidopsis thalian...	[more]
RS211_ARATH	1.385e-33	77.78	40S ribosomal protein S21-1 OS=Arabidopsis thalian...	[more]
RS21_MAIZE	5.263e-33	77.78	40S ribosomal protein S21 OS=Zea mays GN=RPS21 PE=...	[more]
RS21_ORYSJ	1.531e-32	76.54	40S ribosomal protein S21 OS=Oryza sativa subsp. j...	[more]
RS21_CYAPA	1.876e-22	65.33	40S ribosomal protein S21 OS=Cyanophora paradoxa G...	[more]
RS21_ASPFU	6.674e-20	56.76	40S ribosomal protein S21 OS=Aspergillus fumigatus...	[more]
RS21_DICDI	3.312e-19	65.15	40S ribosomal protein S21 OS=Dictyostelium discoid...	[more]
RS21_ASHGO	1.259e-18	57.33	40S ribosomal protein S21 OS=Ashbya gossypii GN=RP...	[more]
RS21_KLULA	3.662e-18	56.00	40S ribosomal protein S21 OS=Kluyveromyces lactis ...	[more]
RS21B_YEAST	4.049e-17	55.41	40S ribosomal protein S21-B OS=Saccharomyces cerev...	[more]

BLAST of Lens_culinaris_v1_Contig513 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q2HVJ1_MEDTR	2.622e-41	83.17	Ribosomal protein S21e OS=Medicago truncatula GN=M...	[more]
B7FGU9_MEDTR	1.102e-39	97.53	Putative uncharacterized protein OS=Medicago trunc...	[more]
Q7XA95_TRIPR	1.031e-37	77.97	Ultraviolet-B-repressible protein OS=Trifolium pra...	[more]
B7FH97_MEDTR	5.117e-37	77.12	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SWG4_SOYBN	1.140e-36	90.12	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SYE0_SOYBN	1.489e-36	88.89	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6T6P9_SOYBN	1.067e-34	88.89	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7M5J1_ARALY	6.916e-34	83.95	40S ribosomal protein S21 OS=Arabidopsis lyrata su...	[more]
D7LUN3_ARALY	1.180e-33	82.72	40S ribosomal protein S21 OS=Arabidopsis lyrata su...	[more]
A5B0Z2_VITVI	1.304e-32	82.72	Putative uncharacterized protein OS=Vitis vinifera...	[more]

BLAST of Lens_culinaris_v1_Contig513 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT5G27700.1	3.160e-36	82.72	\| Symbols: \| Ribosomal protein S21e \| chr5:98075...	[more]
AT3G53890.2	1.328e-34	77.78	\| Symbols: \| Ribosomal protein S21e \| chr3:19955...	[more]
AT3G53890.1	1.328e-34	77.78	\| Symbols: \| Ribosomal protein S21e \| chr3:19955...	[more]
AT2G06520.1	1.425e-20	51.61	\| Symbols: PSBX \| photosystem II subunit X \| chr2:...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 12..31 score
None	No IPR available	SEG	seg	seg	coord: 75..82 score
IPR001931	Ribosomal protein S21e	PANTHER	PTHR10442	40S RIBOSOMAL PROTEIN S21E	coord: 34..113 score: 9.5
IPR001931	Ribosomal protein S21e	PFAM	PF01249	Ribosomal_S21e	coord: 33..109 score: 4.4
IPR018279	Ribosomal protein S21e, conserved site	PROSITE	PS00996	RIBOSOMAL_S21E	coord: 43..51 score
IPR009518	Photosystem II PsbX	PFAM	PF06596	PsbX	coord: 95..131 score: 8.6

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Lens_culinaris_v1_Contig513 ID=Lens_culinaris_v1_Contig513; Name=Lens_culinaris_v1_Contig513; organism=Lens culinaris; type=contig; length=1063bp
TTAAGAATAAGAAAACTAATGCTCAAGTGAAGATCAAGAGTCACATATTA
TGATATTACACACAACAACACAGAGTTCATATCTGAATACATTATACAGA
TAAATATGACAATGAGAGAAGTACTAAAATACCCTCTTGCTGGGCCTGAG
AATCTTCTCAGCCTCGCTTGACAGGATCGAAATTGGAAACACCGATAACA
GCACCAAGAATGGCAGTAACCACAACTCCACCAGAAACAATACTGAGCAA
GAAATTCTTCAAAGAAGGTGAAACGGTAGCAGCTTCAGCTACATCAGGAA
TCACCATTTGAGCTGTCAGTGCAGCTGCTGTCAGCCCTGTCACAACTTTC
TCCTTCAGCGATGCTTTCACTTGAAACCTTCCGTTTGACTTTGATGATGG
CCTCAGAGTCAATGGTGTCTTCAAGAATGCATGAGAGGTTGGTGACTCTA
ACTTCTTGGTGGCGGCAGAGGTTACTGGCACAATCATTGAGATAATTGAA
GTTGAAGCCATTGGAAGTGGTTGTTTGGAGAGAAGGGAAATGGGTGCTTG
GTTTTTCTAGTTTATTTTTGTCAAAGCGATTTCACAAAAAAAAGACTCAA
GATGCAGAACGAAGAAGGACAAATCACCGAGCTTTACATTCCCAGGAAGT
GTTCTGCTACTAACAGATTGATTACTGCTAAGGATCATGCTTCCGTTCAG
ATTAACGTAGGTCATTTGGATGAGAGTGGTGTTTACAATGGTCACTTCTC
CACCTTCGCTCTATGTGGTTTCACTCGCGCACAGGGAGATGCTGACAGTG
GTATTGATCGCTTATGGCAGAAAAAGAAAACTGAACTTAAGCAATAGATG
ACATGATTACATCTTTGTTGTGTTTCTTTTTGACAGATTTTATGTGTTGA
GTTCCACCTTTCCTTAGATAATGGATTAATTTTGATCAATGTATTGCAAT
ACTTGTTTTGAATATCCTTTGGATACCTTCTCATTGCTTTTGTCTTAAAT
GCTTTTCAACTGATTGCTCAAATTTGTTCGGTTTTTTCTATAATATTTTT
AAGGTTGATTTAT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome
GO:0009523	photosystem II
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation
GO:0015979	photosynthesis

Vocabulary: **INTERPRO**
Term	Definition
IPR001931	Ribosomal_S21e
IPR018279	Ribosomal_S21e_CS
IPR009518	PSII_PsbX

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Lens_culinaris_v1_Contig513