Pisum_sativum_v1_Contig2660

Contig Overview
NamePisum_sativum_v1_Contig2660
Unique NamePisum_sativum_v1_Contig2660
Typecontig
OrganismPisum sativum (pea)
Sequence length604
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
AM162034AM162034Pisum sativumEST
GH720431GH720431Pisum sativumEST
GH720416GH720416Pisum sativumEST


Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
AM162034ESTAM162034:1..216 -
GH720431ESTGH720431:1..606 +
GH720416ESTGH720416:1..606 +
Homology
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. SwissProt
Match: RL373_ARATH (60S ribosomal protein L37-3 OS=Arabidopsis thaliana GN=RPL37C PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.642e-22
Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACAYPAAR R YNWSVKA   K   G  RMR
Sbjct:    4 GTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKT-TGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. SwissProt
Match: RL372_ARATH (60S ribosomal protein L37-2 OS=Arabidopsis thaliana GN=RPL37B PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.642e-22
Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACAYPAAR R YNWSVKA   K   G  RMR
Sbjct:    4 GTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKT-TGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. SwissProt
Match: RL371_ARATH (60S ribosomal protein L37-1 OS=Arabidopsis thaliana GN=RPL37A PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.642e-22
Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACAYPAAR R YNWSVKA   K   G  RMR
Sbjct:    4 GTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKT-TGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. SwissProt
Match: RL37_SPOFR (60S ribosomal protein L37 OS=Spodoptera frugiperda GN=RpL37 PE=3 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 4.184e-18
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GT SFGKRRNKTHTLC RCGR S+H+QKS+C+ C YPAA++R Y+WSVKA   K   G  RMR
Sbjct:    4 GTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKT-TGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. SwissProt
Match: RL37_EMENI (60S ribosomal protein L37 OS=Emericella nidulans GN=rpl37 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.322e-18
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = -1 
Query:   41 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKA 190
            GT SFGKR NKTHTLC RCGRRS+H+QKS C+ C YPAA+ RKYNWS KA
Sbjct:    4 GTSSFGKRHNKTHTLCRRCGRRSYHIQKSTCANCGYPAAKTRKYNWSEKA 53
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. SwissProt
Match: RL37_RAT (60S ribosomal protein L37 OS=Rattus norvegicus GN=Rpl37 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.077e-17
Identity = 41/63 (65.08%), Postives = 46/63 (73.02%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GT SFGKRRNKTHTLC RCG +++HLQKS C  C YPA R RKYNWS KA   ++  G  RMR
Sbjct:    4 GTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAK-RRNTTGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. SwissProt
Match: RL37_MOUSE (60S ribosomal protein L37 OS=Mus musculus GN=Rpl37 PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.077e-17
Identity = 41/63 (65.08%), Postives = 46/63 (73.02%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GT SFGKRRNKTHTLC RCG +++HLQKS C  C YPA R RKYNWS KA   ++  G  RMR
Sbjct:    4 GTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAK-RRNTTGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. SwissProt
Match: RL37_HUMAN (60S ribosomal protein L37 OS=Homo sapiens GN=RPL37 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.077e-17
Identity = 41/63 (65.08%), Postives = 46/63 (73.02%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GT SFGKRRNKTHTLC RCG +++HLQKS C  C YPA R RKYNWS KA   ++  G  RMR
Sbjct:    4 GTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAK-RRNTTGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. SwissProt
Match: RL37_BOVIN (60S ribosomal protein L37 OS=Bos taurus GN=RPL37 PE=3 SV=4)

HSP 1 Score: 88.9669 bits (219), Expect = 2.077e-17
Identity = 41/63 (65.08%), Postives = 46/63 (73.02%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GT SFGKRRNKTHTLC RCG +++HLQKS C  C YPA R RKYNWS KA   ++  G  RMR
Sbjct:    4 GTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAK-RRNTTGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. SwissProt
Match: RL371_DROME (Probable 60S ribosomal protein L37-A OS=Drosophila melanogaster GN=RpL37a PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.077e-17
Identity = 37/50 (74.00%), Postives = 42/50 (84.00%), Query Frame = -1 
Query:   41 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKA 190
            GT SFGKR NKTHTLC RCGR S+H+QKS C+ C YPAA++R YNWSVKA
Sbjct:    4 GTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKA 53
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. TrEMBL
Match: B9RS60_RICCO (Ribosomal protein L37 OS=Ricinus communis GN=RCOM_0803120 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.350e-23
Identity = 53/63 (84.13%), Postives = 55/63 (87.30%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPA+R+RKYNWSVKA   K   G  RMR
Sbjct:    4 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPASRLRKYNWSVKAIRRKT-TGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. TrEMBL
Match: B7FGF1_MEDTR (Ribosomal protein L37 OS=Medicago truncatula PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.350e-23
Identity = 54/63 (85.71%), Postives = 54/63 (85.71%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWS KA   K   G  RMR
Sbjct:    4 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSEKAIRRKT-TGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. TrEMBL
Match: A9P9H4_POPTR (Ribosomal protein L37 OS=Populus trichocarpa GN=POPTRDRAFT_717772 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.221e-22
Identity = 53/63 (84.13%), Postives = 55/63 (87.30%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAARVRKYNWSVKA   K   G  RM+
Sbjct:    4 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSVKAIRRKT-TGTGRMK 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. TrEMBL
Match: D3GC12_9ROSI (Ribosomal protein L37 OS=Jatropha curcas PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.721e-22
Identity = 53/63 (84.13%), Postives = 54/63 (85.71%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAAR RKYNWSVKA   K   G  RMR
Sbjct:    4 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKT-TGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. TrEMBL
Match: Q6SPR2_SOYBN (Ribosomal protein L37 OS=Glycine max GN=RPL37 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.553e-22
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACA+PAAR RKYNWSVKA   K   G  RMR
Sbjct:    4 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKT-TGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. TrEMBL
Match: B9RQN1_RICCO (Ribosomal protein L37 OS=Ricinus communis GN=RCOM_1494440 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.553e-22
Identity = 53/63 (84.13%), Postives = 53/63 (84.13%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAAR R YNWSVKA   K   G  RMR
Sbjct:    4 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARKRSYNWSVKAIRRKT-TGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. TrEMBL
Match: D7U0J1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017081001 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.641e-22
Identity = 51/63 (80.95%), Postives = 54/63 (85.71%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+AC +PAAR+RKYNWSVKA   K   G  RMR
Sbjct:   24 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACGFPAARIRKYNWSVKAIRRKT-TGTGRMR 85
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. TrEMBL
Match: B6UF11_MAIZE (Ribosomal protein L37 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.641e-22
Identity = 52/77 (67.53%), Postives = 58/77 (75.32%), Query Frame = -1 
Query:    2 ENGRRHSGRS*HCDGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 232
            +  R+ +G      GTGSFGKRRNKTHTLC+RCGRRSFHLQKS CS+C YPAAR+RKYNWSVKA   K   G  RMR
Sbjct:    6 QTARKSTGGKAPRKGTGSFGKRRNKTHTLCIRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKT-TGTGRMR 81
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. TrEMBL
Match: A9NJS5_PICSI (Ribosomal protein L37 OS=Picea sitchensis PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.641e-22
Identity = 50/63 (79.37%), Postives = 54/63 (85.71%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNKTHTLC+RCGRRSFH+QKSRCSACAYP+ R+RKYNWSVKA   K   G  RMR
Sbjct:    4 GTGSFGKRRNKTHTLCIRCGRRSFHIQKSRCSACAYPSKRIRKYNWSVKAIRRKT-TGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. TrEMBL
Match: B9IKN5_POPTR (Ribosomal protein L37 (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_668951 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.061e-22
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACA+PAARVRKYNWS KA   K   G  RM+
Sbjct:   20 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARVRKYNWSEKAIRRKT-TGTGRMK 81
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. TAIR peptide
Match: AT3G16080.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr3:5454892-5455677 FORWARD LENGTH=95)

HSP 1 Score: 105.916 bits (263), Expect = 1.712e-23
Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACAYPAAR R YNWSVKA   K   G  RMR
Sbjct:    4 GTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKT-TGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. TAIR peptide
Match: AT1G15250.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr1:5248825-5249381 REVERSE LENGTH=95)

HSP 1 Score: 105.916 bits (263), Expect = 1.712e-23
Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACAYPAAR R YNWSVKA   K   G  RMR
Sbjct:    4 GTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKT-TGTGRMR 65
[Close]
BLAST of Pisum_sativum_v1_Contig2660 vs. TAIR peptide
Match: AT1G52300.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr1:19475213-19476152 REVERSE LENGTH=95)

HSP 1 Score: 105.916 bits (263), Expect = 1.712e-23
Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = -1 
Query:    2 GTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAY*EKDYRGVVRMR 190
            GTGSFGKRRNK+HTLCVRCGRRSFH+QKSRCSACAYPAAR R YNWSVKA   K   G  RMR
Sbjct:    4 GTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKT-TGTGRMR 65
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2660 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RL373_ARATH1.642e-2280.9560S ribosomal protein L37-3 OS=Arabidopsis thalian... [more]
RL372_ARATH1.642e-2280.9560S ribosomal protein L37-2 OS=Arabidopsis thalian... [more]
RL371_ARATH1.642e-2280.9560S ribosomal protein L37-1 OS=Arabidopsis thalian... [more]
RL37_SPOFR4.184e-1866.6760S ribosomal protein L37 OS=Spodoptera frugiperda... [more]
RL37_EMENI9.322e-1876.0060S ribosomal protein L37 OS=Emericella nidulans G... [more]
RL37_RAT2.077e-1765.0860S ribosomal protein L37 OS=Rattus norvegicus GN=... [more]
RL37_MOUSE2.077e-1765.0860S ribosomal protein L37 OS=Mus musculus GN=Rpl37... [more]
RL37_HUMAN2.077e-1765.0860S ribosomal protein L37 OS=Homo sapiens GN=RPL37... [more]
RL37_BOVIN2.077e-1765.0860S ribosomal protein L37 OS=Bos taurus GN=RPL37 P... [more]
RL371_DROME2.077e-1774.00Probable 60S ribosomal protein L37-A OS=Drosophila... [more]
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BLAST of Pisum_sativum_v1_Contig2660 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RS60_RICCO9.350e-2384.13Ribosomal protein L37 OS=Ricinus communis GN=RCOM_... [more]
B7FGF1_MEDTR9.350e-2385.71Ribosomal protein L37 OS=Medicago truncatula PE=3 ... [more]
A9P9H4_POPTR1.221e-2284.13Ribosomal protein L37 OS=Populus trichocarpa GN=PO... [more]
D3GC12_9ROSI2.721e-2284.13Ribosomal protein L37 OS=Jatropha curcas PE=3 SV=1[more]
Q6SPR2_SOYBN3.553e-2282.54Ribosomal protein L37 OS=Glycine max GN=RPL37 PE=3... [more]
B9RQN1_RICCO3.553e-2284.13Ribosomal protein L37 OS=Ricinus communis GN=RCOM_... [more]
D7U0J1_VITVI4.641e-2280.95Whole genome shotgun sequence of line PN40024, sca... [more]
B6UF11_MAIZE4.641e-2267.53Ribosomal protein L37 OS=Zea mays PE=3 SV=1[more]
A9NJS5_PICSI4.641e-2279.37Ribosomal protein L37 OS=Picea sitchensis PE=3 SV=... [more]
B9IKN5_POPTR6.061e-2282.54Ribosomal protein L37 (Fragment) OS=Populus tricho... [more]
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BLAST of Pisum_sativum_v1_Contig2660 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G16080.11.712e-2380.95| Symbols: | Zinc-binding ribosomal protein famil... [more]
AT1G15250.11.712e-2380.95| Symbols: | Zinc-binding ribosomal protein famil... [more]
AT1G52300.11.712e-2380.95| Symbols: | Zinc-binding ribosomal protein famil... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0006772S globulinPRINTSPR005512SGLOBULINcoord: 16..35
score: 1.5e-09coord: 60..78
score: 1.5e-09coord: 83..97
score: 1.5
IPR013781Glycoside hydrolase, subgroup, catalytic coreGENE3D3.20.20.80no descriptioncoord: 12..109
score: 1
IPR017853Glycoside hydrolase, catalytic coreSUPERFAMILY51445(Trans)glycosidasescoord: 2..109
score: 2.9
NoneNo IPR availableSEGsegsegcoord: 56..73
score: NAcoord: 118..123
score
NoneNo IPR availableSEGsegsegcoord: 35..52
score
NoneNo IPR availableSEGsegsegcoord: 41..53
score
IPR001569Ribosomal protein L37ePANTHERPTHR1076860S RIBOSOMAL PROTEIN L37coord: 3..53
score: 1.7
IPR001569Ribosomal protein L37ePFAMPF01907Ribosomal_L37ecoord: 3..53
score: 3.5
IPR011331Ribosomal protein L37ae/L37e, N-terminal domainGENE3D2.20.25.30no descriptioncoord: 3..53
score: 4.5
IPR011332Ribosomal protein, zinc-binding domainSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 1..54
score: 6.9
IPR018267Ribosomal protein L37e, conserved sitePROSITEPS01077RIBOSOMAL_L37Ecoord: 4..23
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2660 ID=Pisum_sativum_v1_Contig2660; Name=Pisum_sativum_v1_Contig2660; organism=Pisum sativum; type=contig; length=604bp
ACCTCATCCTGACCACTCCCCGGTAGTCTTTCTCCTAATAGGCCTTAACA
CTCCAGTTATATTTCCTGACACGTGCAGCTGGGTAAGCACATGCTGAGCA
GCGACTCTTCTGGAGATGGAAACTGCGACGGCCACACCTAACACAGAGTG
TGTGGGTCTTGTTCCTTCTCTTACCGAAACTACCTGTTCCATCACAATGT
CAGGATCTACCACTGTGACGCCTACCATTTTCTGAGAATACATTGGCATG
GGAGATTATATAGATCATTTTCCTGATGAAATGATCAATGCCGATATAAA
AGAATTCCACTTCATTCTGTGCTTTGCCACAGAGACGCATGTTGACGGAA
AAGGCACAGGACTTTTTGACAGCAATTGGAACTTCACGAACTTTAGCCCA
GAAAAGGTGGTGGAACTAAAGAAAAAGCTTAACAACGTGAAAGTGAAAGT
GGTAATAAGCATAGGAGGCATTGGCCCTGAAGATACATTCAACCCTAAGA
ATAATGAAGACTGGATTGTGAATGCCACATCATCAATCAAAGGGATCATC
CTAAACTACCAGACCAAAGTCCCCAACGATGACGTACCTCGGCCGCGACC
ACGC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0043169cation binding
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: INTERPRO
TermDefinition
IPR000677Chitinase-like
IPR013781Glyco_hydro_catalytic_dom
IPR017853Glycoside_hydrolase_SF
IPR001569Ribosomal_L37e
IPR011331Ribosomal_L37ae/L37e
IPR011332Ribosomal_zn-bd
IPR018267Ribosomal_L37e_CS