Pisum_sativum_v1_Contig2820

Contig Overview
NamePisum_sativum_v1_Contig2820
Unique NamePisum_sativum_v1_Contig2820
Typecontig
OrganismPisum sativum (pea)
Sequence length380
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CD860544CD860544Pisum sativumEST
GH719570GH719570Pisum sativumEST


Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CD860544ESTCD860544:1..380 +
GH719570ESTGH719570:35..375 +
Homology
BLAST of Pisum_sativum_v1_Contig2820 vs. TrEMBL
Match: Q3LSN3_PEA (Putative uncharacterized protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.647e-41
Identity = 79/98 (80.61%), Postives = 79/98 (80.61%), Query Frame = 3
Query:   87 HQTKAHQLXXXXXXXXXXXXXXXXXXXERKLAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            HQTKAHQL                   ERKLAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK
Sbjct:   19 HQTKAHQLNNFNTTITTKTTTISNSSNERKLAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 116          
BLAST of Pisum_sativum_v1_Contig2820 vs. TrEMBL
Match: Q3LSN2_PEA (Putative uncharacterized protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.647e-41
Identity = 79/98 (80.61%), Postives = 79/98 (80.61%), Query Frame = 3
Query:   87 HQTKAHQLXXXXXXXXXXXXXXXXXXXERKLAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            HQTKAHQL                   ERKLAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK
Sbjct:   19 HQTKAHQLNNFNTTITTKTTTISNSSNERKLAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 116          
BLAST of Pisum_sativum_v1_Contig2820 vs. TrEMBL
Match: B7FJM2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.763e-29
Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 3
Query:  177 LAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFL 374
            +AGTCNLFRGKWVYDASYPLYDPS+CPFIDPQFNCQK+GR D  YQKYRW P +C++PRFN L+FL
Sbjct:   43 IAGTCNLFRGKWVYDASYPLYDPSTCPFIDPQFNCQKHGRKDKLYQKYRWMPFSCNMPRFNGLNFL 108          
BLAST of Pisum_sativum_v1_Contig2820 vs. TrEMBL
Match: C6TI78_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.154e-28
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 3
Query:  171 RKLAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            RKLAGTCNLF GKWVYDAS PLYDPS+CPFIDPQFNCQK+GR D  YQKYRW P +C LPRFN L+FL +
Sbjct:   29 RKLAGTCNLFSGKWVYDASNPLYDPSTCPFIDPQFNCQKHGRSDKLYQKYRWMPFSCPLPRFNGLNFLQR 98          
BLAST of Pisum_sativum_v1_Contig2820 vs. TrEMBL
Match: Q9SIN2_ARATH (Expressed protein OS=Arabidopsis thaliana GN=At2g42570 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.141e-26
Identity = 52/71 (73.24%), Postives = 56/71 (78.87%), Query Frame = 3
Query:  171 RKLA-GTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            R+LA G CN FRG WVYD  YPLYDP  CPFIDPQFNC+KYGRPD  Y KYRWQP +CSLPRFN L FL +
Sbjct:   40 RELASGRCNWFRGNWVYDVKYPLYDPYKCPFIDPQFNCKKYGRPDNAYLKYRWQPSSCSLPRFNGLYFLRR 110          
BLAST of Pisum_sativum_v1_Contig2820 vs. TrEMBL
Match: D7LIU1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483351 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.141e-26
Identity = 52/71 (73.24%), Postives = 57/71 (80.28%), Query Frame = 3
Query:  171 RKLA-GTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            R+LA G CN FRG WVYDA YPLYDP  CPFIDPQFNC+KYGRPD  Y K+RWQP +CSLPRFN L FL +
Sbjct:   39 RELASGRCNWFRGNWVYDAKYPLYDPYKCPFIDPQFNCKKYGRPDNAYLKFRWQPSSCSLPRFNGLYFLRR 109          
BLAST of Pisum_sativum_v1_Contig2820 vs. TrEMBL
Match: B9S988_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1014620 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.141e-26
Identity = 47/70 (67.14%), Postives = 60/70 (85.71%), Query Frame = 3
Query:  171 RKLAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            ++++ TCNLF+GKWV D +YPLYD S CPFIDP+FNCQK+GRPDTQY KY WQP +C++PRFN +DFL +
Sbjct:   46 KQVSSTCNLFQGKWVVDPAYPLYDASGCPFIDPEFNCQKFGRPDTQYLKYSWQPDSCNVPRFNGVDFLRR 115          
BLAST of Pisum_sativum_v1_Contig2820 vs. TrEMBL
Match: D7TJJ6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021192001 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.036e-25
Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 3
Query:  171 RKLAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            RK   +CNLF+GKWV+DASYP YD S+CPFIDP+F+CQKYGRPD QY KY W+P +C LPRF+ LDFL +
Sbjct:   50 RKQVSSCNLFQGKWVFDASYPFYDASNCPFIDPEFDCQKYGRPDKQYLKYSWKPDSCDLPRFDGLDFLRR 119          
BLAST of Pisum_sativum_v1_Contig2820 vs. TrEMBL
Match: B9MW28_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_592181 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.036e-25
Identity = 52/70 (74.29%), Postives = 56/70 (80.00%), Query Frame = 3
Query:  171 RKLAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            R+LAG CN FRGKWV+D  YPLYD S+CPFIDPQFNCQKYGR D+ Y KYRWQP  C LPRFN L FL K
Sbjct:   43 RELAGKCNWFRGKWVFDPKYPLYD-SNCPFIDPQFNCQKYGRHDSSYLKYRWQPFACDLPRFNGLYFLEK 111          
BLAST of Pisum_sativum_v1_Contig2820 vs. TrEMBL
Match: A5AGC3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036403 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.036e-25
Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 3
Query:  171 RKLAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            RK   +CNLF+GKWV+DASYP YD S+CPFIDP+F+CQKYGRPD QY KY W+P +C LPRF+ LDFL +
Sbjct:   40 RKQVSSCNLFQGKWVFDASYPFYDASNCPFIDPEFDCQKYGRPDKQYLKYSWKPDSCDLPRFDGLDFLRR 109          
BLAST of Pisum_sativum_v1_Contig2820 vs. TAIR peptide
Match: AT2G42570.1 (| Symbols: TBL39 | TRICHOME BIREFRINGENCE-LIKE 39 | chr2:17717498-17719921 REVERSE LENGTH=367)

HSP 1 Score: 119.783 bits (299), Expect = 4.198e-28
Identity = 52/71 (73.24%), Postives = 56/71 (78.87%), Query Frame = 3
Query:  171 RKLA-GTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            R+LA G CN FRG WVYD  YPLYDP  CPFIDPQFNC+KYGRPD  Y KYRWQP +CSLPRFN L FL +
Sbjct:   40 RELASGRCNWFRGNWVYDVKYPLYDPYKCPFIDPQFNCKKYGRPDNAYLKYRWQPSSCSLPRFNGLYFLRR 110          
BLAST of Pisum_sativum_v1_Contig2820 vs. TAIR peptide
Match: AT2G31110.2 (| Symbols: | Plant protein of unknown function (DUF828) | chr2:13258522-13262071 REVERSE LENGTH=364)

HSP 1 Score: 108.997 bits (271), Expect = 7.410e-25
Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 3
Query:  183 GTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            G CNL RGKWVYD+SYPLY   SCPFID +FNCQK GRPDT YQ +RWQP +C LPRF+  +F+ +
Sbjct:   43 GRCNLARGKWVYDSSYPLYSAFSCPFIDSEFNCQKAGRPDTNYQHFRWQPFSCPLPRFDGANFMRR 108          
BLAST of Pisum_sativum_v1_Contig2820 vs. TAIR peptide
Match: AT2G30900.1 (| Symbols: TBL43 | TRICHOME BIREFRINGENCE-LIKE 43 | chr2:13150481-13152417 FORWARD LENGTH=368)

HSP 1 Score: 107.842 bits (268), Expect = 1.651e-24
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 3
Query:  189 CNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            CN+++G WVYD SYPLYD  +CPFI+ QFNC+  GRPD++Y KYRWQP  C+LPRFN LDFL +
Sbjct:   43 CNIYQGSWVYDKSYPLYDSKNCPFIERQFNCKSNGRPDSEYLKYRWQPSGCNLPRFNGLDFLGR 106          
BLAST of Pisum_sativum_v1_Contig2820 vs. TAIR peptide
Match: AT2G34070.1 (| Symbols: TBL37 | TRICHOME BIREFRINGENCE-LIKE 37 | chr2:14387631-14390160 REVERSE LENGTH=385)

HSP 1 Score: 103.219 bits (256), Expect = 4.066e-23
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 3
Query:  171 RKLAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            RK    CNLF+G+WV+DASYP YD S+CPFID +F+C K+GRPD Q+ KY WQP +C++PRF+   FL K
Sbjct:   59 RKQTSGCNLFQGRWVFDASYPFYDSSTCPFIDGEFDCLKFGRPDKQFLKYSWQPDSCTVPRFDGEAFLKK 128          
BLAST of Pisum_sativum_v1_Contig2820 vs. TAIR peptide
Match: AT1G29050.1 (| Symbols: TBL38 | TRICHOME BIREFRINGENCE-LIKE 38 | chr1:10136376-10139082 REVERSE LENGTH=380)

HSP 1 Score: 102.449 bits (254), Expect = 6.935e-23
Identity = 41/71 (57.75%), Postives = 55/71 (77.46%), Query Frame = 3
Query:  168 ERKLAGTCNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            +++ A  CNLF+G+WV+DASYP YD S CPFID +F+C K+GRPD Q+ KY WQP +C++PRF+   FL K
Sbjct:   54 KQRRASGCNLFQGRWVFDASYPFYDSSKCPFIDGEFDCLKFGRPDKQFLKYSWQPESCTIPRFDGGAFLRK 124          
BLAST of Pisum_sativum_v1_Contig2820 vs. TAIR peptide
Match: AT5G58600.2 (| Symbols: PMR5 | Plant protein of unknown function (DUF828) | chr5:23684372-23685679 REVERSE LENGTH=291)

HSP 1 Score: 96.2857 bits (238), Expect = 4.970e-21
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  186 TCNLFRGKWVYDASYPLYDPSSCP-FIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            TC+LF G WV D SYPLY P+ CP  ++P+F+CQ YGRPD+ Y KYRWQP  C+LP FN   FL K
Sbjct:   65 TCSLFLGTWVRDNSYPLYKPADCPGVVEPEFDCQMYGRPDSDYLKYRWQPQNCNLPTFNGAQFLLK 130          
BLAST of Pisum_sativum_v1_Contig2820 vs. TAIR peptide
Match: AT5G58600.1 (| Symbols: PMR5, TBL44 | Plant protein of unknown function (DUF828) | chr5:23683944-23685679 REVERSE LENGTH=402)

HSP 1 Score: 96.2857 bits (238), Expect = 4.970e-21
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  186 TCNLFRGKWVYDASYPLYDPSSCP-FIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            TC+LF G WV D SYPLY P+ CP  ++P+F+CQ YGRPD+ Y KYRWQP  C+LP FN   FL K
Sbjct:   65 TCSLFLGTWVRDNSYPLYKPADCPGVVEPEFDCQMYGRPDSDYLKYRWQPQNCNLPTFNGAQFLLK 130          
BLAST of Pisum_sativum_v1_Contig2820 vs. TAIR peptide
Match: AT3G14850.2 (| Symbols: TBL41 | TRICHOME BIREFRINGENCE-LIKE 41 | chr3:4995615-4997611 FORWARD LENGTH=356)

HSP 1 Score: 94.3597 bits (233), Expect = 1.889e-20
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 3
Query:  189 CNLFRGKWVYDASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            C++F G+WV D SYPLY+ S+CPFI  +F+CQ+ GRPD  Y  +RWQPL+C L RFN L FL K
Sbjct:   34 CDMFTGRWVKDDSYPLYNSSTCPFIRHEFSCQRNGRPDLDYSTFRWQPLSCKLARFNGLQFLKK 97          
BLAST of Pisum_sativum_v1_Contig2820 vs. TAIR peptide
Match: AT1G73140.1 (| Symbols: TBL31 | Plant protein of unknown function (DUF828) | chr1:27502133-27503743 REVERSE LENGTH=413)

HSP 1 Score: 88.9669 bits (219), Expect = 7.935e-19
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 3
Query:  168 ERKLAGTCNLFRGKWVYD-ASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFL 374
            E +L  +CN+F G+WV+D  SYPLY   SCP++  Q  CQ+ GRPD+ YQ +RW+P +C LPRFNAL  L
Sbjct:   60 EDQLDESCNVFEGQWVWDNVSYPLYTEKSCPYLVKQTTCQRNGRPDSYYQNWRWKPSSCDLPRFNALKLL 129          
BLAST of Pisum_sativum_v1_Contig2820 vs. TAIR peptide
Match: AT1G78710.2 (| Symbols: | TRICHOME BIREFRINGENCE-LIKE 42 | chr1:29601499-29604557 FORWARD LENGTH=299)

HSP 1 Score: 87.8113 bits (216), Expect = 1.768e-18
Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 3
Query:  174 KLAGTCNLFRGKWVYD-ASYPLYDPSSCPFIDPQFNCQKYGRPDTQYQKYRWQPLTCSLPRFNALDFLAK 380
            K A  CN+++G+W+YD +S PLY  S+CPFI    +CQK+GRPD  Y  YRWQP  C +PRFN  DFL +
Sbjct:   26 KNATKCNIYQGRWIYDNSSNPLYGTSTCPFIG--LDCQKFGRPDKNYLHYRWQPTGCDIPRFNGRDFLTR 93          
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2820 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q3LSN3_PEA2.647e-4180.61Putative uncharacterized protein OS=Pisum sativum ... [more]
Q3LSN2_PEA2.647e-4180.61Putative uncharacterized protein OS=Pisum sativum ... [more]
B7FJM2_MEDTR6.763e-2980.30Putative uncharacterized protein OS=Medicago trunc... [more]
C6TI78_SOYBN1.154e-2878.57Putative uncharacterized protein OS=Glycine max PE... [more]
Q9SIN2_ARATH9.141e-2673.24Expressed protein OS=Arabidopsis thaliana GN=At2g4... [more]
D7LIU1_ARALY9.141e-2673.24Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9S988_RICCO9.141e-2667.14Putative uncharacterized protein OS=Ricinus commun... [more]
D7TJJ6_VITVI2.036e-2568.57Whole genome shotgun sequence of line PN40024, sca... [more]
B9MW28_POPTR2.036e-2574.29Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5AGC3_VITVI2.036e-2568.57Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of Pisum_sativum_v1_Contig2820 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10
Match NameE-valueIdentityDescription
AT2G42570.14.198e-2873.24| Symbols: TBL39 | TRICHOME BIREFRINGENCE-LIKE 39 ... [more]
AT2G31110.27.410e-2566.67| Symbols: | Plant protein of unknown function (D... [more]
AT2G30900.11.651e-2465.63| Symbols: TBL43 | TRICHOME BIREFRINGENCE-LIKE 43 ... [more]
AT2G34070.14.066e-2360.00| Symbols: TBL37 | TRICHOME BIREFRINGENCE-LIKE 37 ... [more]
AT1G29050.16.935e-2357.75| Symbols: TBL38 | TRICHOME BIREFRINGENCE-LIKE 38 ... [more]
AT5G58600.24.970e-2160.61| Symbols: PMR5 | Plant protein of unknown functio... [more]
AT5G58600.14.970e-2160.61| Symbols: PMR5, TBL44 | Plant protein of unknown ... [more]
AT3G14850.21.889e-2059.38| Symbols: TBL41 | TRICHOME BIREFRINGENCE-LIKE 41 ... [more]
AT1G73140.17.935e-1954.29| Symbols: TBL31 | Plant protein of unknown functi... [more]
AT1G78710.21.768e-1854.29| Symbols: | TRICHOME BIREFRINGENCE-LIKE 42 | chr... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 9..24
score: NAcoord: 33..51
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2820 ID=Pisum_sativum_v1_Contig2820; Name=Pisum_sativum_v1_Contig2820; organism=Pisum sativum; type=contig; length=380bp
CCTCTTCAAAGTAAGGTCCGAAACCCAACAAAATGGGTTTTCTATTACCG
ACTCTGTTTTTATCTCTGCTTCTTCTATTTTCTTCGCACCAAACAAAAGC
TCATCAACTCAATAACTTCAACACAACAATAACAACAAAAACAACTACCA
TTTCCAATAGTAGTAACGAAAGAAAACTCGCAGGAACATGCAATTTGTTT
CGTGGCAAATGGGTCTATGACGCTTCATATCCTCTCTATGATCCTTCTTC
TTGTCCTTTCATAGATCCACAGTTCAACTGTCAAAAATACGGTCGACCTG
ATACGCAGTATCAGAAATATAGATGGCAACCACTCACTTGTTCTTTACCT
AGGTTCAATGCATTGGATTTTCTAGCAAAG
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