GT624844

EST Overview


Name	GT624844
Unique Name	GT624844
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	536

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT624844 vs. TrEMBL
Match: D7TPA7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_104.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011077001 PE=4 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.127e-46
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 298
            MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG
Sbjct:   45 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 137

[Close]

BLAST of GT624844 vs. TrEMBL
Match: B9SFP2_RICCO (Speckle-type POZ protein, putative OS=Ricinus communis GN=RCOM_0648390 PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.305e-46
Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 2

Query:   17 KMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 298
            + LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDI+LLHDATRREARGG
Sbjct:  407 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIDLLHDATRREARGG 500

[Close]

BLAST of GT624844 vs. TrEMBL
Match: A9PD52_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_813708 PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.305e-46
Identity = 90/93 (96.77%), Postives = 93/93 (100.00%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 298
            MLFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVD++LLHDATRREARGG
Sbjct:    1 MLFFSYFKDLVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDVDLLHDATRREARGG 93

[Close]

BLAST of GT624844 vs. TrEMBL
Match: A9PBV8_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.776e-45
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 298
            MLFFSYFKDLVG+EVTVELKNDLAIRG LHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVD++LLHDATRREARGG
Sbjct:    1 MLFFSYFKDLVGKEVTVELKNDLAIRGNLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDVDLLHDATRREARGG 93

[Close]

BLAST of GT624844 vs. TrEMBL
Match: Q1H595_ARATH (At1g03330 OS=Arabidopsis thaliana GN=At1g03330 PE=4 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.837e-44
Identity = 87/93 (93.55%), Postives = 91/93 (97.85%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 298
            MLFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLP +GVD++LLHDA RREARGG
Sbjct:    1 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPKDGVDVDLLHDAARREARGG 93

[Close]

BLAST of GT624844 vs. TrEMBL
Match: D7KCE0_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470311 PE=4 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.837e-44
Identity = 87/93 (93.55%), Postives = 91/93 (97.85%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 298
            MLFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLP +GVD++LLHDA RREARGG
Sbjct:    1 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPKDGVDVDLLHDAARREARGG 93

[Close]

BLAST of GT624844 vs. TrEMBL
Match: C6SWL3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.837e-44
Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 298
            MLFFSYFKDLVGREV VELKNDLAI+GTLHSVDQYLNIKLENT VV+Q+KYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG
Sbjct:    1 MLFFSYFKDLVGREVIVELKNDLAIKGTLHSVDQYLNIKLENTSVVNQEKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 93

[Close]

BLAST of GT624844 vs. TrEMBL
Match: Q9ZVT4_ARATH (F15K9.7 protein OS=Arabidopsis thaliana GN=F15K9.7 PE=4 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.598e-43
Identity = 86/92 (93.48%), Postives = 90/92 (97.83%), Query Frame = 2

Query:   23 LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 298
            LFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLP +GVD++LLHDA RREARGG
Sbjct:   23 LFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPKDGVDVDLLHDAARREARGG 114

[Close]

BLAST of GT624844 vs. TrEMBL
Match: Q0J7Y5_ORYSJ (Os08g0154700 protein OS=Oryza sativa subsp. japonica GN=Os08g0154700 PE=4 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 3.393e-43
Identity = 86/93 (92.47%), Postives = 91/93 (97.85%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 298
            MLFFSYFK+LVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYV LP +GVDI++LHDATRREARGG
Sbjct:    1 MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVLLPQDGVDIDILHDATRREARGG 93

[Close]

BLAST of GT624844 vs. TrEMBL
Match: C5YGY2_SORBI (Putative uncharacterized protein Sb07g003620 OS=Sorghum bicolor GN=Sb07g003620 PE=4 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.393e-43
Identity = 86/93 (92.47%), Postives = 91/93 (97.85%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 298
            MLFFSYFK+LVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYV LP +GVDI++LHDATRREARGG
Sbjct:    1 MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVLLPQDGVDIDILHDATRREARGG 93

[Close]

BLAST of GT624844 vs. SwissProt
Match: LSM2_MOUSE (U6 snRNA-associated Sm-like protein LSm2 OS=Mus musculus GN=Lsm2 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.863e-32
Identity = 66/90 (73.33%), Postives = 77/90 (85.56%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREA 289
            MLF+S+FK LVG++V VELKNDL+I GTLHSVDQYLNIKL +  V D +KYPHMLSV+NCFIRGSVVRYVQLP + VD +LL DA R+EA
Sbjct:    1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEA 90

[Close]

BLAST of GT624844 vs. SwissProt
Match: LSM2_HUMAN (U6 snRNA-associated Sm-like protein LSm2 OS=Homo sapiens GN=LSM2 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.863e-32
Identity = 66/90 (73.33%), Postives = 77/90 (85.56%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREA 289
            MLF+S+FK LVG++V VELKNDL+I GTLHSVDQYLNIKL +  V D +KYPHMLSV+NCFIRGSVVRYVQLP + VD +LL DA R+EA
Sbjct:    1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEA 90

[Close]

BLAST of GT624844 vs. SwissProt
Match: LSM2_DICDI (Probable U6 snRNA-associated Sm-like protein LSm2 OS=Dictyostelium discoideum GN=lsm2 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.120e-30
Identity = 62/91 (68.13%), Postives = 78/91 (85.71%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREAR 292
            MLFFS++K LVG+E+TVELKNDL+I G L SVDQ+LNIKL++ +V ++DKYP+M+SV+NCFIRGSVVRYV LP E VD+E L D +R EAR
Sbjct:    1 MLFFSFYKSLVGKEITVELKNDLSITGLLQSVDQFLNIKLKDIKVNEEDKYPYMISVKNCFIRGSVVRYVHLPAEDVDVETLQDHSRLEAR 91

[Close]

BLAST of GT624844 vs. SwissProt
Match: LSM2_YEAST (U6 snRNA-associated Sm-like protein LSm2 OS=Saccharomyces cerevisiae GN=LSM2 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.167e-26
Identity = 59/89 (66.29%), Postives = 68/89 (76.40%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRRE 286
            MLFFS+FK LV +EV VELKND+ I+GTL SVDQ+LN+KL+N    D+ KYPH+ SVRN FIRGS VRYV L    VD  LL DATRRE
Sbjct:    1 MLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRNIFIRGSTVRYVYLNKNMVDTNLLQDATRRE 89

[Close]

BLAST of GT624844 vs. SwissProt
Match: LSM2_SCHPO (U6 snRNA-associated Sm-like protein LSm2 OS=Schizosaccharomyces pombe GN=lsm2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.681e-25
Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRRE 286
            MLF+S+FK L+  EVTVELKND++IRG L SVDQ+LN+KLEN  VVD  KYPHM +V++ FIRGSVVRYV +    VD  LL DA RR+
Sbjct:    1 MLFYSFFKTLIDTEVTVELKNDMSIRGILKSVDQFLNVKLENISVVDASKYPHMAAVKDLFIRGSVVRYVHMSSAYVDTILLADACRRD 89

[Close]

BLAST of GT624844 vs. SwissProt
Match: LSM2_ENTBH (Probable U6 snRNA-associated Sm-like protein LSm2 OS=Enterocytozoon bieneusi (strain H348) GN=LSM2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.891e-12
Identity = 36/91 (39.56%), Postives = 58/91 (63.74%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKY----PHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATR 280
            MLFF YFK  +  E+ V LKND++I G L +VD +LNIK+EN   +  +++      + +++ C IRGS ++ V+L   G++ E + +ATR
Sbjct:    1 MLFFEYFKSQLNNEIIVNLKNDISISGILKNVDPFLNIKIENVIAISTNEFIKINKSITNIQLCSIRGSAIKSVELKKNGLE-EHMVEATR 90

[Close]

BLAST of GT624844 vs. SwissProt
Match: LSM2_ENCCU (Probable U6 snRNA-associated Sm-like protein LSm2 OS=Encephalitozoon cuniculi GN=LSM2 PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 3.293e-7
Identity = 25/70 (35.71%), Postives = 43/70 (61.43%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYV 229
            MLF+ +F+  +G  V+V LK  + + G L  +D YLN+ L + R++    +P + S+  C IRGS ++Y+
Sbjct:    1 MLFYEFFRSSIGSRVSVMLKAGVYVSGRLGGIDPYLNLSLLDVRIL--SSHPGLSSISVCSIRGSSIKYI 68

[Close]

BLAST of GT624844 vs. TAIR peptide
Match: AT1G03330.1 (| Symbols: | Small nuclear ribonucleoprotein family protein | chr1:818161-819297 REVERSE LENGTH=93)

HSP 1 Score: 180.259 bits (456), Expect = 5.677e-46
Identity = 87/93 (93.55%), Postives = 91/93 (97.85%), Query Frame = 2

Query:   20 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 298
            MLFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLP +GVD++LLHDA RREARGG
Sbjct:    1 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPKDGVDVDLLHDAARREARGG 93

The following BLAST results are available for this feature:

BLAST of GT624844 vs. TrEMBL
BLAST of GT624844 vs. SwissProt
BLAST of GT624844 vs. TAIR peptide

BLAST of GT624844 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7TPA7_VITVI	1.127e-46	100.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9SFP2_RICCO	7.305e-46	96.81	Speckle-type POZ protein, putative OS=Ricinus comm...	[more]
A9PD52_POPTR	7.305e-46	96.77	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PBV8_POPTR	2.776e-45	95.70	Putative uncharacterized protein OS=Populus tricho...	[more]
Q1H595_ARATH	6.837e-44	93.55	At1g03330 OS=Arabidopsis thaliana GN=At1g03330 PE=...	[more]
D7KCE0_ARALY	6.837e-44	93.55	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
C6SWL3_SOYBN	6.837e-44	94.62	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q9ZVT4_ARATH	2.598e-43	93.48	F15K9.7 protein OS=Arabidopsis thaliana GN=F15K9.7...	[more]
Q0J7Y5_ORYSJ	3.393e-43	92.47	Os08g0154700 protein OS=Oryza sativa subsp. japoni...	[more]
C5YGY2_SORBI	3.393e-43	92.47	Putative uncharacterized protein Sb07g003620 OS=So...	[more]

BLAST of GT624844 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 7


Match Name	E-value	Identity	Description
LSM2_MOUSE	3.863e-32	73.33	U6 snRNA-associated Sm-like protein LSm2 OS=Mus mu...	[more]
LSM2_HUMAN	3.863e-32	73.33	U6 snRNA-associated Sm-like protein LSm2 OS=Homo s...	[more]
LSM2_DICDI	2.120e-30	68.13	Probable U6 snRNA-associated Sm-like protein LSm2 ...	[more]
LSM2_YEAST	3.167e-26	66.29	U6 snRNA-associated Sm-like protein LSm2 OS=Saccha...	[more]
LSM2_SCHPO	2.681e-25	64.04	U6 snRNA-associated Sm-like protein LSm2 OS=Schizo...	[more]
LSM2_ENTBH	9.891e-12	39.56	Probable U6 snRNA-associated Sm-like protein LSm2 ...	[more]
LSM2_ENCCU	3.293e-7	35.71	Probable U6 snRNA-associated Sm-like protein LSm2 ...	[more]

BLAST of GT624844 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G03330.1	5.677e-46	93.55	\| Symbols: \| Small nuclear ribonucleoprotein fami...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001163	Like-Sm ribonucleoprotein (LSM) domain	PFAM	PF01423	LSM	coord: 13..78 score: 8.6
IPR006649	Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type	SMART	SM00651	no description	coord: 11..78 score: 1.3
IPR010920	Like-Sm ribonucleoprotein (LSM)-related domain	SUPERFAMILY	50182	Sm-like ribonucleoproteins	coord: 9..99 score: 3.6
IPR016654	U6 snRNA-associated Sm-like protein LSm2	PIR	PIRSF016394	U6 snRNA-associated Sm-like protein LSm2	coord: 7..99 score: 5.9
None	No IPR available	GENE3D	2.30.30.100	no description	coord: 7..88 score: 7.3
None	No IPR available	PANTHER	PTHR13829	SNRNP CORE PROTEIN FAMILY MEMBER	coord: 1..99 score: 1.3
None	No IPR available	PANTHER	PTHR13829:SF2	U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM2	coord: 1..99 score: 1.3

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT624844 ID=GT624844; Name=GT624844; organism=Lens culinaris; type=EST; length=536bp
GTTTTTCATAGTAGCGAAAATGTTGTTTTTCTCGTACTTCAAAGATTTGG
TGGGAAGAGAAGTGACGGTAGAACTCAAGAACGATTTGGCCATCAGAGGG
ACATTACATTCTGTTGATCAATACCTCAACATCAAGCTCGAAAATACTCG
TGTTGTTGATCAAGACAAGTACCCTCACATGCTTTCTGTAAGGAACTGCT
TCATCAGAGGATCAGTGGTGAGATATGTGCAATTGCCTCCAGAAGGTGTG
GACATTGAACTATTGCATGATGCCACAAGGAGAGAAGCCCGGGGTGGTTG
ATTTTGTTATTATTGTAATTTATTGGACAAGACATCTATAAGCTGGAATA
TCATAGATGTTATTATTCCTGCTTAAGAAAGAAACTATTAGAATGTCAAG
GCTATTTATCTTAAGAATTTTTCTGGTTTACCGTTGACTAAGTAATATGC
ATCTATTCTAGAAATGTGATAATGTATGGAATTATGCAAACAGGTGTAAT
GCACAATATATGCAATGTTTAGAACATCCGGCATCT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR001163	Sm_dom_euk/arc
IPR006649	Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type
IPR010920	LSM_dom_sf
IPR016654	U6_snRNA_Lsm2

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