GT620506

EST Overview


Name	GT620506
Unique Name	GT620506
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	688

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

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BLAST of GT620506 vs. TrEMBL
Match: A2Q574_MEDTR (Cyclin-like F-box OS=Medicago truncatula GN=MtrDRAFT_AC160516g7v2 PE=4 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.120e-32
Identity = 76/155 (49.03%), Postives = 104/155 (67.10%), Query Frame = 2

Query:  224 VNENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQTLDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHILPCISSCRSLTSLKLSVSPKGRHNYGRTLFPKTLD 688
            V E+EDRLSDLPDCVILHILSFL+  + V+TCILS R  NLWK +PTL+L S++          VSRILSLR+ S  L+ L F+R G++ P LL++++ YA + +VQ   +++  DI H   C+ SC +LTSLKL ++      Y  TLFP +L+
Sbjct:   12 VKEDEDRLSDLPDCVILHILSFLDTIDAVQTCILSKRWNNLWKYLPTLILSSSN--------KFVSRILSLRNASTPLRALHFQRHGTMYPRLLQRMIKYAVSHHVQELSINLSSDIQHFPTCLFSCHTLTSLKLVINHPTL--YAGTLFPSSLN 156

[Close]

BLAST of GT620506 vs. TrEMBL
Match: A2Q620_MEDTR (Cyclin-like F-box; Agenet OS=Medicago truncatula GN=MtrDRAFT_AC172742g24v1 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.213e-14
Identity = 61/171 (35.67%), Postives = 89/171 (52.05%), Query Frame = 2

Query:  194 IFPESKRLKHVNENE--DRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLV-LHSTDXXXXXXXXXXVSRILSLRDGSVALQTLDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDI---CHILPCISSCRSLTSLKLSVSPKGRHNYGRT-LFPKTL 685
            I  + K  K  +E E  +R+S+LPDC++LHI+SFL A++ VRTCILS R K+L KR+ TL  + S D           S +LS RD S +L  L  +         L  ++ YA   N+Q   + +   +     +LP I +  SLT L+LS    G     R+ + PK+L
Sbjct:  131 ITKQLKSHKGTDETEAGNRISELPDCILLHIMSFLEARDAVRTCILSKRWKDLCKRLTTLTYIPSWDENSFKNFK---SWVLSSRDQSCSLWNLTIDTQFQEGEEDLHTLIQYALFHNLQNLNIKINPSLTPKSDLLPLILASNSLTFLELSYRRGGSIAAARSPILPKSL 298

[Close]

BLAST of GT620506 vs. TrEMBL
Match: Q2HS79_MEDTR (Cyclin-like F-box; Agenet OS=Medicago truncatula GN=MtrDRAFT_AC155883g16v2 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.390e-13
Identity = 55/152 (36.18%), Postives = 81/152 (53.29%), Query Frame = 2

Query:  200 PESKRLKHVNENED----RLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLV-LHSTDXXXXXXXXXXVSRILSLRDGSVALQTLDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDIC---HILPCISSCRSLTSLKLS 631
            P  ++L+   E E+    R+ +LPDC++LHI+SFL A++ VRTCILS R K+L KR+ TL  + S D           S +LS RD S +L+ L  +         L  +V YA   N+Q   + +   +     +LP I +  SLT L+LS
Sbjct:  129 PIPQKLRGTEETEENRRNRIGELPDCILLHIMSFLEARDAVRTCILSKRWKDLCKRLTTLAYIPSWDESSFKNFQ---SWVLSSRDQSCSLRNLTVDTQFLEGEEDLHTLVQYALFHNLQHLNIKINQSLTPKPELLPLILTSHSLTFLELS 277

[Close]

BLAST of GT620506 vs. TrEMBL
Match: Q2HVE5_MEDTR (Cyclin-like F-box OS=Medicago truncatula GN=MtrDRAFT_AC148918g6v2 PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.953e-13
Identity = 51/155 (32.90%), Postives = 79/155 (50.97%), Query Frame = 2

Query:  200 PESKRLKHVN----ENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQTLDFERVG---SIEPHLLKKIVNYAFARNVQRFGMSVKGDICHILP-----CISSCRSLTSLKL 628
            P+S R    N    E ED   D+PDCV+ HILSF+  K+ VRTC+LS R   LW  VP+L  +S            V  +L  RD S A++ L + R G   + + +L  K++++A +R V+   ++++  +    P      +  C SL  L+L
Sbjct:   21 PDSARQDKDNNEAVEGEDMFDDIPDCVVRHILSFMETKDAVRTCVLSKRWTCLWTSVPSLNFNSKSFSRLADFRKFVLWVLFRRDSS-AVKVLTYCRAGVDYATDQNLFNKVIDHATSRGVEEIRVNLRAKVHGSPPVDIPLSLLKCESLKRLEL 174

[Close]

BLAST of GT620506 vs. TrEMBL
Match: B9N7R5_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTRDRAFT_786395 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.983e-11
Identity = 52/178 (29.21%), Postives = 86/178 (48.31%), Query Frame = 2

Query:  185 EATIFPESKRLKHVNENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTL---------VLHSTDXXXXXXXXXXVSRILSLRDGSVALQTLDFERVGSIEPHLLKKIVNYAFARNVQRFGM-SVKGDICHILP-CISSCRSLTSLKLSVSPKGRHNYGRTLFPKTL 685
            E T  P +++   +N NEDR+S LP+ ++ HILSF++A +VV+TC+LS R  N+WK  P L         +++S                + +R  +V    L  +     +  +++ ++ YA   +V+   + +   D+  +LP C   C SL SLKL V        G    PK+L
Sbjct:   17 EPTGEPRTRKRSSLNNNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYDDDMNNFTDFIYHVLVRRNNVKAFKLSLDTRRDCQYSVVESLIYYAVKHHVEEISINTAHWDVPIVLPRCFFDCESLRSLKLKVD-------GGLALPKSL 187

[Close]

BLAST of GT620506 vs. TrEMBL
Match: B9EVL9_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_01373 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.499e-11
Identity = 49/145 (33.79%), Postives = 73/145 (50.34%), Query Frame = 2

Query:  200 PESKRLKHVNENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGS-VALQTLDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHILPCISSCRSLTSLKLS 631
            PESK+       +DR+S LP  ++ H+LSFL AKEVVRTC+L+ R ++LWK +P  +L  T              +L LRD S +   T DF      +  ++   + Y     V+   +++ G     LP +S    LT L+LS
Sbjct:    3 PESKKALVEGGGDDRISFLPTALLQHVLSFLQAKEVVRTCVLARRWRHLWKSMP--ILRVTGAGDARAFHTFTYHLLLLRDRSPLESCTFDFNVFSKDDMPIVNLWIRYVLLCQVRVLTLAIGGHQLTDLPVVSPI--LTRLELS 143

[Close]

BLAST of GT620506 vs. TrEMBL
Match: B9N7R7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_786397 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.110e-10
Identity = 53/173 (30.64%), Postives = 86/173 (49.71%), Query Frame = 2

Query:  206 SKRLKHVNENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVP----------TLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQ-TLDFERVGSIEPHLLKKIVNYAFARNVQRFGM-SVKGDICHILP-CISSCRSLTSLKLSVSPKGRHNYGRTLFPKTL 685
            +++   +N NEDR+S LP+ ++ HILSFL+A +VV+TC+LS R  N+WK  P          +L+               +S +L  R+   A + +LD  R    +  +++ ++ YA   +V+   + +   D+  +LP C   C SL SLKL V        G    PK+L
Sbjct:    5 TRKRSSLNNNEDRISTLPNVLLHHILSFLDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLISSYYYDDDMNNFTDFISHVLVRRNNVKAFKLSLDTRR--DCQYSVVESLIYYAVKHHVEEISINTAHWDVPIVLPRCFFDCESLRSLKLKVD-------GGLALPKSL 168

[Close]

BLAST of GT620506 vs. TrEMBL
Match: B8BF29_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31232 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.110e-10
Identity = 49/145 (33.79%), Postives = 73/145 (50.34%), Query Frame = 2

Query:  200 PESKRLKHVNENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGS-VALQTLDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHILPCISSCRSLTSLKLS 631
            PESK+       +DR+S LP  ++ H+LSFL AKEVVRTC+L+ R ++LWK +P  +L  T              +L LRD S +   T DF      +  ++   + Y     V+   +++ G     LP +S    LT L+LS
Sbjct:  366 PESKKALVEGGGDDRISFLPTALLQHVLSFLQAKEVVRTCVLARRWRHLWKPMP--ILRVTGAGDARAFHTFTYHLLLLRDRSPLESCTFDFNVFSKDDMPIVNLWIRYVLLCQVRVLTLAIGGHQLTDLPVVSPI--LTRLELS 506

[Close]

BLAST of GT620506 vs. TrEMBL
Match: B9N7R4_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTRDRAFT_786394 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.893e-10
Identity = 51/178 (28.65%), Postives = 86/178 (48.31%), Query Frame = 2

Query:  185 EATIFPESKRLKHVNENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTL---------VLHSTDXXXXXXXXXXVSRILSLRDGSVALQTLDFERVGSIEPHLLKKIVNYAFARNVQRFGM-SVKGDICHILP-CISSCRSLTSLKLSVSPKGRHNYGRTLFPKTL 685
            E T  P +++   +N NEDR+S LP+ ++ HILSF++A +VV+TC+LS R  N+WK  P L         +++S                + +R  ++    +  + +      L++ ++ YA   +V+   + +   D+  +LP C   C SL SLKL V        G    PK+L
Sbjct:   17 EPTGEPRTRKRSSLNNNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYDDEVNNFTDFIYHVLVRRHNLKAVKISLDILRDTRCSLVESLIYYAVKHHVEEISVNTAHWDMPIVLPRCFFDCESLRSLKLKVD-------GGIALPKSL 187

[Close]

BLAST of GT620506 vs. TrEMBL
Match: Q2R998_ORYSJ (F-box domain containing protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g09500 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.230e-10
Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 2

Query:  200 PESKRLKHVNENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGS-VALQTLDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHILPCISSCRSLTSLKLS 631
            PESK+       +DR+S LP  ++ H+LSFL AKEVVRTC+L+ R ++LWK +P  +L  T              +L  RD S +   T DF      +  ++   + Y     V+   +++ G     LP +S    LT L+LS
Sbjct:    3 PESKKALVEGGGDDRISFLPTALLQHVLSFLQAKEVVRTCVLARRWRHLWKSMP--ILRVTGAGDARAFHTFTYHLLLXRDRSPLESCTFDFNVFSKDDMPIVNLWIRYVLLCQVRVLTLAIGGHQLTDLPVVSPI--LTRLELS 143

[Close]

BLAST of GT620506 vs. SwissProt
Match: FDL8_ARATH (Putative F-box/FBD/LRR-repeat protein At1g66300 OS=Arabidopsis thaliana GN=At1g66300 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 4.538e-9
Identity = 48/148 (32.43%), Postives = 71/148 (47.97%), Query Frame = 2

Query:  200 PESKRLKHVNENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQ---TLDFERVGSIEP--HLLKKIVNYAFARNVQRFGMSVKGDICHILPCISSCRSLTSLKL 628
            PES   K   E  D + DLP+ +I H+L  L+ K+V++ C+LST+ + LW+ VP L L  +D          V R LS    S   +     D + VG  E     + + +N    R VQ   + ++     I P +  C+SL SLKL
Sbjct:   17 PESSDKKSGYE-VDWVRDLPESLICHVLLNLSTKDVIKNCVLSTKWRYLWRYVPGLDLDCSDFTEYNTFVSFVDRFLSTNTESYLNKFKLGFDCDLVGDEETGNAQMARWINDVVKRKVQH--LDLEWGALEIPPIVYVCKSLVSLKL 161

[Close]

BLAST of GT620506 vs. SwissProt
Match: FBL13_ARATH (F-box/LRR-repeat protein 13 OS=Arabidopsis thaliana GN=FBL13 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 7.741e-9
Identity = 48/152 (31.58%), Postives = 70/152 (46.05%), Query Frame = 2

Query:  203 ESKRLKHV----NENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQ-TLDFERVGSIEP--HLLKKIVNYAFARNVQRFGM---SVKGDICHILPCISSCRSLTSLKL 628
            +  R KHV    ++  D +S LPDC++  +L  L  K+VV+T +LS R +NLWK VP L L +TD          V   L     S   +  L ++     +P   L+ + +N    R VQ   +   S       +   I +C SL SLKL
Sbjct:    2 DEDREKHVRAKGSDEVDWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLDLDNTDFQEFNTFLSFVDSFLDFNSESFLQKFILKYDCDDEYDPDIFLIGRWINTIVTRKVQHIDVLDDSYGSWEVQLPSSIYTCESLVSLKL 153

[Close]

BLAST of GT620506 vs. SwissProt
Match: FBL47_ARATH (F-box/LRR-repeat protein At3g26922 OS=Arabidopsis thaliana GN=At3g26922 PE=2 SV=2)

HSP 1 Score: 59.6918 bits (143), Expect = 1.725e-8
Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = 2

Query:  233 NEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQTLDFE-RVGSIEPHLLKKIVNYAFARNVQRFGM---SVKGDICHILPC-ISSCRSLTSLKL 628
            NEDR+SDLP+ ++L ILS L  K+VV T +LS   ++LWK VPTL     +          +   L L + +  L++L    R G      +   +  A+AR+V+   +   SVKG    I P  + +C +L SL L
Sbjct:   12 NEDRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFDYENNQSEDETYSEIVCRLLLSNKAPFLESLHLGFRFGECRSVEVGMWIGIAYARHVRDLVLHVESVKGSF--IFPTGLYNCETLESLTL 146

[Close]

BLAST of GT620506 vs. SwissProt
Match: FDL3_ARATH (F-box/FBD/LRR-repeat protein At1g16930 OS=Arabidopsis thaliana GN=At1g16930 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 2.942e-8
Identity = 47/146 (32.19%), Postives = 69/146 (47.26%), Query Frame = 2

Query:  215 LKHVNENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQTLD-FERVGSIEPH---LLKKIVNYAFARNVQRFGMSVKGD----ICHILPCISSCRSLTSLKL 628
            +K    N DR+S+LPD ++  ILS L+ KE V T +LS R +NLW  VP L L S +          V+R L    GS   Q L+ F+ +  +  H     K  +N    R V  F +  + D    +  +   + SC  L +L+L
Sbjct:    7 VKEKQRNSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNNFPDDDVFVSFVNRFL----GSENEQHLERFKLIYEVNEHDASRFKSWINAVIKRRVCHFNVHNEVDDDDELVKMPLSLYSCERLVNLQL 148

[Close]

BLAST of GT620506 vs. SwissProt
Match: FB261_ARATH (F-box protein At5g18780 OS=Arabidopsis thaliana GN=At5g18780 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 8.559e-8
Identity = 46/139 (33.09%), Postives = 68/139 (48.92%), Query Frame = 2

Query:  236 EDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGS----VALQT-LDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHILP--CISSCRSLTSLKLS 631
            EDR+S LP+ ++ HILSFL  K+ VRT +LS+R ++LW  VP L L  +D          V + L+ R  S      L T  D   + +++  L++          +Q F +      C +L    I  C +L SLKLS
Sbjct:   10 EDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDFSDDNPSASFVDKFLNFRGESYLRGFKLNTDHDVYDISTLDACLMR-----LDKCKIQHFEIENCFGFCILLMPLIIPMCHTLVSLKLS 143

[Close]

BLAST of GT620506 vs. SwissProt
Match: FBD5_ARATH (FBD-associated F-box protein At1g66310 OS=Arabidopsis thaliana GN=At1g66310 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.118e-7
Identity = 43/146 (29.45%), Postives = 67/146 (45.89%), Query Frame = 2

Query:  212 RLKHVNENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQ-------TLDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHILPCISSCRSLTSLKL 628
            R K  ++  D L DLP+ ++ HIL  L  K+VV+T +LS++ +NLW+ VP L L S+D          + R +S        +        L+ + V   E   + + +N    R V    + +      I P +  C SL SLKL
Sbjct:   10 RAKQSDDEVDWLRDLPESLLCHILLNLPTKDVVKTSVLSSKWRNLWRLVPGLDLDSSDFTENNTFVSFIDRFMSFHSDLYLKKFKLRFFCNLNGDEVS--ENAHIARWINDVVKRKVH--NLDLTWGAVEIPPILYLCNSLVSLKL 151

[Close]

BLAST of GT620506 vs. SwissProt
Match: FBD11_ARATH (FBD-associated F-box protein At3g52670 OS=Arabidopsis thaliana GN=At3g52670 PE=1 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 1.907e-7
Identity = 42/134 (31.34%), Postives = 67/134 (50.00%), Query Frame = 2

Query:  236 EDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXV--SRILSLRDGSVALQTLDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHILP-CISSCRSLTSLKL 628
            EDR++ LP+ +IL ILSFL  + V+ T +LS + ++LWK VP L   S D          +     LSL+  +  L++L      S+ P  +   +  AFAR+++   + V        P  +  C +L +LKL
Sbjct:    9 EDRMNQLPEDLILRILSFLPTELVIATSVLSKQWRSLWKLVPNLEFDSDDYESEHYTFSEIVCKSFLSLK--APVLKSLHLSFRKSVNPVDIGLWIGIAFARHLRELVLYVAPKQTFTFPSSLCICNTLETLKL 140

[Close]

BLAST of GT620506 vs. SwissProt
Match: FDL12_ARATH (Putative F-box/FBD/LRR-repeat protein At1g78840 OS=Arabidopsis thaliana GN=At1g78840 PE=4 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.490e-7
Identity = 53/138 (38.41%), Postives = 71/138 (51.45%), Query Frame = 2

Query:  230 ENEDRLSDL-PDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQ-TLDFE-RVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHI-LP-CISSCRSLTSLKL 628
            EN+D +S L PD V+  IL  L  K+ V+T ILSTR + +W+RVP L L+ T+          V+R L L   S+  Q  L+F+ R    E  L  K V+    R VQ     +  + C I LP  IS C +L  LKL
Sbjct:    2 ENKDLISQLLPDHVLHEILLKLATKDSVKTSILSTRWRYIWQRVPGLDLNQTN-FRYKGLKGFVNRFLDLDKKSLIYQLKLEFDGRKYETEGSLFNKWVDSVVTRGVQH----LVNNYCPIKLPGSISMCETLVHLKL 134

[Close]

BLAST of GT620506 vs. SwissProt
Match: FDL7_ARATH (Putative F-box/FBD/LRR-repeat protein At1g66290 OS=Arabidopsis thaliana GN=At1g66290 PE=4 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 3.252e-7
Identity = 44/145 (30.34%), Postives = 65/145 (44.83%), Query Frame = 2

Query:  239 DRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRIL--------------SLRDGSVALQTLDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHILPCISSCRSLTSLKLS 631
            D +SDLP+ +I+ +L  L  K+V++T +LST+ +N+W+ VP L L +            + R +              S  DG V L T  +            K +  A  R VQ   ++  G    I P I +C SL SLKLS
Sbjct:   29 DWISDLPEALIVLVLLNLPTKDVIKTSVLSTKWRNIWRYVPRLDLDNRHFTEFDSLASFIDRFMRSNRKVNKFKLRCGSDLDGDVDLATCSW------------KWIYMAIKRKVQHIDVTWPG--VRIYPEIYNCESLVSLKLS 159

[Close]

BLAST of GT620506 vs. SwissProt
Match: FDL19_ARATH (Putative F-box/FBD/LRR-repeat protein At3g49040 OS=Arabidopsis thaliana GN=At3g49040 PE=4 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 5.548e-7
Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 2

Query:  230 ENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQTLDFERVGSIEPHLLKKIVNYAFARNVQ 544
            ENEDR+S+L + +++HI+S L  K VV T +LS R +++WK V  L   S            V R   L      L++LD E    ++   L  +V  AFAR+V+
Sbjct:    8 ENEDRISELHEALLVHIMSSLPTKTVVATSVLSKRWRHVWKTVQNLKFVS---KYHQTFSEDVYRFFMLHKAPF-LESLDLEFSNQLDASDLGILVGIAFARHVR 108

[Close]

BLAST of GT620506 vs. TAIR peptide
Match: AT1G66300.1 (| Symbols: | F-box/RNI-like/FBD-like domains-containing protein | chr1:24716497-24718050 REVERSE LENGTH=456)

HSP 1 Score: 61.6178 bits (148), Expect = 4.580e-10
Identity = 48/148 (32.43%), Postives = 71/148 (47.97%), Query Frame = 2

Query:  200 PESKRLKHVNENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQ---TLDFERVGSIEP--HLLKKIVNYAFARNVQRFGMSVKGDICHILPCISSCRSLTSLKL 628
            PES   K   E  D + DLP+ +I H+L  L+ K+V++ C+LST+ + LW+ VP L L  +D          V R LS    S   +     D + VG  E     + + +N    R VQ   + ++     I P +  C+SL SLKL
Sbjct:   17 PESSDKKSGYE-VDWVRDLPESLICHVLLNLSTKDVIKNCVLSTKWRYLWRYVPGLDLDCSDFTEYNTFVSFVDRFLSTNTESYLNKFKLGFDCDLVGDEETGNAQMARWINDVVKRKVQH--LDLEWGALEIPPIVYVCKSLVSLKL 161

[Close]

BLAST of GT620506 vs. TAIR peptide
Match: AT1G69630.1 (| Symbols: | F-box/RNI-like superfamily protein | chr1:26191640-26193174 REVERSE LENGTH=451)

HSP 1 Score: 60.8474 bits (146), Expect = 7.813e-10
Identity = 48/152 (31.58%), Postives = 70/152 (46.05%), Query Frame = 2

Query:  203 ESKRLKHV----NENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQ-TLDFERVGSIEP--HLLKKIVNYAFARNVQRFGM---SVKGDICHILPCISSCRSLTSLKL 628
            +  R KHV    ++  D +S LPDC++  +L  L  K+VV+T +LS R +NLWK VP L L +TD          V   L     S   +  L ++     +P   L+ + +N    R VQ   +   S       +   I +C SL SLKL
Sbjct:    2 DEDREKHVRAKGSDEVDWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLDLDNTDFQEFNTFLSFVDSFLDFNSESFLQKFILKYDCDDEYDPDIFLIGRWINTIVTRKVQHIDVLDDSYGSWEVQLPSSIYTCESLVSLKL 153

[Close]

BLAST of GT620506 vs. TAIR peptide
Match: AT3G26922.1 (| Symbols: | F-box/RNI-like superfamily protein | chr3:9922858-9923891 FORWARD LENGTH=306)

HSP 1 Score: 59.6918 bits (143), Expect = 1.741e-9
Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = 2

Query:  233 NEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQTLDFE-RVGSIEPHLLKKIVNYAFARNVQRFGM---SVKGDICHILPC-ISSCRSLTSLKL 628
            NEDR+SDLP+ ++L ILS L  K+VV T +LS   ++LWK VPTL     +          +   L L + +  L++L    R G      +   +  A+AR+V+   +   SVKG    I P  + +C +L SL L
Sbjct:   12 NEDRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFDYENNQSEDETYSEIVCRLLLSNKAPFLESLHLGFRFGECRSVEVGMWIGIAYARHVRDLVLHVESVKGSF--IFPTGLYNCETLESLTL 146

[Close]

BLAST of GT620506 vs. TAIR peptide
Match: AT1G16930.1 (| Symbols: | F-box/RNI-like/FBD-like domains-containing protein | chr1:5789987-5791534 FORWARD LENGTH=449)

HSP 1 Score: 58.9214 bits (141), Expect = 2.969e-9
Identity = 47/146 (32.19%), Postives = 69/146 (47.26%), Query Frame = 2

Query:  215 LKHVNENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQTLD-FERVGSIEPH---LLKKIVNYAFARNVQRFGMSVKGD----ICHILPCISSCRSLTSLKL 628
            +K    N DR+S+LPD ++  ILS L+ KE V T +LS R +NLW  VP L L S +          V+R L    GS   Q L+ F+ +  +  H     K  +N    R V  F +  + D    +  +   + SC  L +L+L
Sbjct:    7 VKEKQRNSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNNFPDDDVFVSFVNRFL----GSENEQHLERFKLIYEVNEHDASRFKSWINAVIKRRVCHFNVHNEVDDDDELVKMPLSLYSCERLVNLQL 148

[Close]

BLAST of GT620506 vs. TAIR peptide
Match: AT5G18780.2 (| Symbols: | F-box/RNI-like superfamily protein | chr5:6264610-6266097 FORWARD LENGTH=441)

HSP 1 Score: 57.3806 bits (137), Expect = 8.638e-9
Identity = 46/139 (33.09%), Postives = 68/139 (48.92%), Query Frame = 2

Query:  236 EDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGS----VALQT-LDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHILP--CISSCRSLTSLKLS 631
            EDR+S LP+ ++ HILSFL  K+ VRT +LS+R ++LW  VP L L  +D          V + L+ R  S      L T  D   + +++  L++          +Q F +      C +L    I  C +L SLKLS
Sbjct:   10 EDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDFSDDNPSASFVDKFLNFRGESYLRGFKLNTDHDVYDISTLDACLMR-----LDKCKIQHFEIENCFGFCILLMPLIIPMCHTLVSLKLS 143

[Close]

BLAST of GT620506 vs. TAIR peptide
Match: AT5G18780.1 (| Symbols: | F-box/RNI-like superfamily protein | chr5:6264610-6266097 FORWARD LENGTH=441)

HSP 1 Score: 57.3806 bits (137), Expect = 8.638e-9
Identity = 46/139 (33.09%), Postives = 68/139 (48.92%), Query Frame = 2

Query:  236 EDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGS----VALQT-LDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHILP--CISSCRSLTSLKLS 631
            EDR+S LP+ ++ HILSFL  K+ VRT +LS+R ++LW  VP L L  +D          V + L+ R  S      L T  D   + +++  L++          +Q F +      C +L    I  C +L SLKLS
Sbjct:   10 EDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDFSDDNPSASFVDKFLNFRGESYLRGFKLNTDHDVYDISTLDACLMR-----LDKCKIQHFEIENCFGFCILLMPLIIPMCHTLVSLKLS 143

[Close]

BLAST of GT620506 vs. TAIR peptide
Match: AT1G66310.1 (| Symbols: | F-box/RNI-like/FBD-like domains-containing protein | chr1:24722971-24724475 REVERSE LENGTH=442)

HSP 1 Score: 56.9954 bits (136), Expect = 1.128e-8
Identity = 43/146 (29.45%), Postives = 67/146 (45.89%), Query Frame = 2

Query:  212 RLKHVNENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQ-------TLDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHILPCISSCRSLTSLKL 628
            R K  ++  D L DLP+ ++ HIL  L  K+VV+T +LS++ +NLW+ VP L L S+D          + R +S        +        L+ + V   E   + + +N    R V    + +      I P +  C SL SLKL
Sbjct:   10 RAKQSDDEVDWLRDLPESLLCHILLNLPTKDVVKTSVLSSKWRNLWRLVPGLDLDSSDFTENNTFVSFIDRFMSFHSDLYLKKFKLRFFCNLNGDEVS--ENAHIARWINDVVKRKVH--NLDLTWGAVEIPPILYLCNSLVSLKL 151

[Close]

BLAST of GT620506 vs. TAIR peptide
Match: AT1G78840.1 (| Symbols: | F-box/RNI-like/FBD-like domains-containing protein | chr1:29639290-29640817 REVERSE LENGTH=439)

HSP 1 Score: 55.8398 bits (133), Expect = 2.513e-8
Identity = 53/138 (38.41%), Postives = 71/138 (51.45%), Query Frame = 2

Query:  230 ENEDRLSDL-PDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQ-TLDFE-RVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHI-LP-CISSCRSLTSLKL 628
            EN+D +S L PD V+  IL  L  K+ V+T ILSTR + +W+RVP L L+ T+          V+R L L   S+  Q  L+F+ R    E  L  K V+    R VQ     +  + C I LP  IS C +L  LKL
Sbjct:    2 ENKDLISQLLPDHVLHEILLKLATKDSVKTSILSTRWRYIWQRVPGLDLNQTN-FRYKGLKGFVNRFLDLDKKSLIYQLKLEFDGRKYETEGSLFNKWVDSVVTRGVQH----LVNNYCPIKLPGSISMCETLVHLKL 134

[Close]

BLAST of GT620506 vs. TAIR peptide
Match: AT1G66290.1 (| Symbols: | F-box/RNI-like superfamily protein | chr1:24713306-24714843 REVERSE LENGTH=453)

HSP 1 Score: 55.4546 bits (132), Expect = 3.283e-8
Identity = 44/145 (30.34%), Postives = 65/145 (44.83%), Query Frame = 2

Query:  239 DRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRIL--------------SLRDGSVALQTLDFERVGSIEPHLLKKIVNYAFARNVQRFGMSVKGDICHILPCISSCRSLTSLKLS 631
            D +SDLP+ +I+ +L  L  K+V++T +LST+ +N+W+ VP L L +            + R +              S  DG V L T  +            K +  A  R VQ   ++  G    I P I +C SL SLKLS
Sbjct:   29 DWISDLPEALIVLVLLNLPTKDVIKTSVLSTKWRNIWRYVPRLDLDNRHFTEFDSLASFIDRFMRSNRKVNKFKLRCGSDLDGDVDLATCSW------------KWIYMAIKRKVQHIDVTWPG--VRIYPEIYNCESLVSLKLS 159

[Close]

BLAST of GT620506 vs. TAIR peptide
Match: AT3G49040.1 (| Symbols: | F-box/RNI-like superfamily protein | chr3:18177676-18179339 FORWARD LENGTH=415)

HSP 1 Score: 54.6842 bits (130), Expect = 5.599e-8
Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 2

Query:  230 ENEDRLSDLPDCVILHILSFLNAKEVVRTCILSTRLKNLWKRVPTLVLHSTDXXXXXXXXXXVSRILSLRDGSVALQTLDFERVGSIEPHLLKKIVNYAFARNVQ 544
            ENEDR+S+L + +++HI+S L  K VV T +LS R +++WK V  L   S            V R   L      L++LD E    ++   L  +V  AFAR+V+
Sbjct:    8 ENEDRISELHEALLVHIMSSLPTKTVVATSVLSKRWRHVWKTVQNLKFVS---KYHQTFSEDVYRFFMLHKAPF-LESLDLEFSNQLDASDLGILVGIAFARHVR 108

The following BLAST results are available for this feature:

BLAST of GT620506 vs. TrEMBL
BLAST of GT620506 vs. SwissProt
BLAST of GT620506 vs. TAIR peptide

BLAST of GT620506 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A2Q574_MEDTR	5.120e-32	49.03	Cyclin-like F-box OS=Medicago truncatula GN=MtrDRA...	[more]
A2Q620_MEDTR	8.213e-14	35.67	Cyclin-like F-box; Agenet OS=Medicago truncatula G...	[more]
Q2HS79_MEDTR	2.390e-13	36.18	Cyclin-like F-box; Agenet OS=Medicago truncatula G...	[more]
Q2HVE5_MEDTR	6.953e-13	32.90	Cyclin-like F-box OS=Medicago truncatula GN=MtrDRA...	[more]
B9N7R5_POPTR	4.983e-11	29.21	F-box family protein OS=Populus trichocarpa GN=POP...	[more]
B9EVL9_ORYSJ	8.499e-11	33.79	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B9N7R7_POPTR	1.110e-10	30.64	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B8BF29_ORYSI	1.110e-10	33.79	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B9N7R4_POPTR	1.893e-10	28.65	F-box family protein OS=Populus trichocarpa GN=POP...	[more]
Q2R998_ORYSJ	3.230e-10	33.10	F-box domain containing protein OS=Oryza sativa su...	[more]

BLAST of GT620506 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
FDL8_ARATH	4.538e-9	32.43	Putative F-box/FBD/LRR-repeat protein At1g66300 OS...	[more]
FBL13_ARATH	7.741e-9	31.58	F-box/LRR-repeat protein 13 OS=Arabidopsis thalian...	[more]
FBL47_ARATH	1.725e-8	34.31	F-box/LRR-repeat protein At3g26922 OS=Arabidopsis ...	[more]
FDL3_ARATH	2.942e-8	32.19	F-box/FBD/LRR-repeat protein At1g16930 OS=Arabidop...	[more]
FB261_ARATH	8.559e-8	33.09	F-box protein At5g18780 OS=Arabidopsis thaliana GN...	[more]
FBD5_ARATH	1.118e-7	29.45	FBD-associated F-box protein At1g66310 OS=Arabidop...	[more]
FBD11_ARATH	1.907e-7	31.34	FBD-associated F-box protein At3g52670 OS=Arabidop...	[more]
FDL12_ARATH	2.490e-7	38.41	Putative F-box/FBD/LRR-repeat protein At1g78840 OS...	[more]
FDL7_ARATH	3.252e-7	30.34	Putative F-box/FBD/LRR-repeat protein At1g66290 OS...	[more]
FDL19_ARATH	5.548e-7	35.24	Putative F-box/FBD/LRR-repeat protein At3g49040 OS...	[more]

BLAST of GT620506 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT1G66300.1	4.580e-10	32.43	\| Symbols: \| F-box/RNI-like/FBD-like domains-cont...	[more]
AT1G69630.1	7.813e-10	31.58	\| Symbols: \| F-box/RNI-like superfamily protein \|...	[more]
AT3G26922.1	1.741e-9	34.31	\| Symbols: \| F-box/RNI-like superfamily protein \|...	[more]
AT1G16930.1	2.969e-9	32.19	\| Symbols: \| F-box/RNI-like/FBD-like domains-cont...	[more]
AT5G18780.2	8.638e-9	33.09	\| Symbols: \| F-box/RNI-like superfamily protein \|...	[more]
AT5G18780.1	8.638e-9	33.09	\| Symbols: \| F-box/RNI-like superfamily protein \|...	[more]
AT1G66310.1	1.128e-8	29.45	\| Symbols: \| F-box/RNI-like/FBD-like domains-cont...	[more]
AT1G78840.1	2.513e-8	38.41	\| Symbols: \| F-box/RNI-like/FBD-like domains-cont...	[more]
AT1G66290.1	3.283e-8	30.34	\| Symbols: \| F-box/RNI-like superfamily protein \|...	[more]
AT3G49040.1	5.599e-8	35.24	\| Symbols: \| F-box/RNI-like superfamily protein \|...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain, cyclin-like	PFAM	PF00646	F-box	coord: 30..69 score: 2.7
IPR001810	F-box domain, cyclin-like	PROFILE	PS50181	FBOX	coord: 28..81 score: 9
IPR022364	F-box domain, Skp2-like	SUPERFAMILY	81383	F-box domain	coord: 26..98 score: 1
None	No IPR available	GENE3D	3.80.10.10	no description	coord: 27..160 score: 1.4
None	No IPR available	SEG	seg	seg	coord: 78..87 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT620506 ID=GT620506; Name=GT620506; organism=Lens culinaris; type=EST; length=688bp
GTAGAAAGAACACCTTCTATGTTTCCGATTCTTCATCCTCAGGCATTCCA
TTTCCACACCCCCTACCAACACAAACCAACTCCAATCCGTCTTTTCATTT
CGATATGCGAATCATCAACTCACAACTCACTCCTCAAACTAGGTAATTAC
CTGAATAACGATGTCGAATTCAGCACCAGAGGACGAGGCAACGATTTTCC
CTGAATCGAAGAGATTAAAGCATGTAAATGAAAACGAAGATAGGCTTAGC
GATTTGCCAGATTGTGTTATTCTTCATATATTATCGTTTTTGAACGCCAA
AGAAGTAGTTCGAACTTGCATTTTGTCCACTAGATTGAAGAATCTTTGGA
AACGTGTTCCTACTCTCGTATTGCATTCTACTGATTTTTCTACTTTCAAG
AGTTTTACCAAATTCGTTTCTAGGATTTTGTCACTTCGCGATGGTTCGGT
TGCACTGCAAACTCTTGATTTTGAACGTGTAGGTAGTATTGAGCCTCATT
TACTTAAGAAAATTGTGAACTATGCTTTTGCTCGAAATGTTCAACGATTT
GGAATGTCTGTGAAAGGTGATATTTGTCATATTCTGCCTTGTATTTCTTC
GTGTCGGAGTTTAACTTCTCTTAAGCTTTCGGTTTCCCCTAAAGGGCGTC
ATAATTACGGGCGAACGTTGTTTCCGAAAACGTTGGAT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR022364	F-box domain, Skp2-like

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