GT627270
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT627270 vs. TrEMBL
Match: B9RD21_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1608840 PE=4 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.070e-34 Identity = 71/83 (85.54%), Postives = 78/83 (93.98%), Query Frame = 3 Query: 3 DPNSVDYVTFEMLISETMVGGLIGRSGSNISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQS 251 DP S DYVT EM++SET+VGGLIGR GSNISRIRNESGAMIKVYGGKGE+KHR IQFGG+AQQVALAKQRVDEYIYSQL+QQ+ Sbjct: 267 DPTSADYVTLEMMVSETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEKKHRHIQFGGTAQQVALAKQRVDEYIYSQLVQQA 349
BLAST of GT627270 vs. TrEMBL
Match: D7SLW0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018244001 PE=4 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.523e-33 Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 3 Query: 3 DPNSVDYVTFEMLISETMVGGLIGRSGSNISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQS 251 DP S DYVT M+I ET+VGGLIGR GSNISRIRNESGAMIKVYGGKGEQ HRQIQFGGSAQQVALAKQRVDEYIYSQL+QQ+ Sbjct: 255 DPASADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQNHRQIQFGGSAQQVALAKQRVDEYIYSQLMQQA 337
BLAST of GT627270 vs. TrEMBL
Match: A5C2J5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031103 PE=4 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.689e-30 Identity = 69/83 (83.13%), Postives = 74/83 (89.16%), Query Frame = 3 Query: 12 SVDYVTFEMLISETMVGGLIGRSGSNISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAQ---QVALAKQRVDEYIYSQLIQQS 251 + DYVT M+I ET+VGGLIGR GSNISRIRNESGAMIKVYGGKGEQ HRQIQFGGSAQ QVALAKQRVDEYIYSQL+QQ+ Sbjct: 233 AADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQNHRQIQFGGSAQQAYQVALAKQRVDEYIYSQLMQQA 315
BLAST of GT627270 vs. TrEMBL
Match: B9MVB1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_591799 PE=4 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.883e-29 Identity = 64/82 (78.05%), Postives = 73/82 (89.02%), Query Frame = 3 Query: 12 SVDYVTFEMLISETMVGGLIGRSGSNISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQSDT 257 + DYVT EM++ ETM+GGLIGRSGSNISRIR ESGA+IKV+GGKG QKHR IQ GS+QQVALAKQRVDEYIYSQL+QQ+ T Sbjct: 255 AADYVTMEMMVPETMMGGLIGRSGSNISRIRVESGAVIKVHGGKGAQKHRHIQLAGSSQQVALAKQRVDEYIYSQLVQQAGT 336
BLAST of GT627270 vs. TrEMBL
Match: A9PA25_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.883e-29 Identity = 64/82 (78.05%), Postives = 73/82 (89.02%), Query Frame = 3 Query: 12 SVDYVTFEMLISETMVGGLIGRSGSNISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQSDT 257 + DYVT EM++ ETM+GGLIGRSGSNISRIR ESGA+IKV+GGKG QKHR IQ GS+QQVALAKQRVDEYIYSQL+QQ+ T Sbjct: 73 AADYVTMEMMVPETMMGGLIGRSGSNISRIRVESGAVIKVHGGKGAQKHRHIQLAGSSQQVALAKQRVDEYIYSQLVQQAGT 154
BLAST of GT627270 vs. TrEMBL
Match: A9NRZ8_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.099e-7 Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 3 Query: 24 VTFEMLISETMVGGLIGRSGSNISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQ 236 VT EM I ++ GG+IG+ G NIS+IR+ SGA++KV G K + R I F G+A QVA A+ V+ +I +Q Sbjct: 329 VTVEMKIPSSVAGGVIGKRGDNISQIRSLSGAIVKVIGEK-DGATRTIFFEGTAHQVATAQNLVNNHINAQ 398 The following BLAST results are available for this feature:
BLAST of GT627270 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 6
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT627270 ID=GT627270; Name=GT627270; organism=Lens culinaris; type=EST; length=439bpback to top |