GT620373

EST Overview


Name	GT620373
Unique Name	GT620373
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	570

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT620373 vs. TrEMBL
Match: A2Q3U1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC155889g19v2 PE=4 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.250e-44
Identity = 100/147 (68.03%), Postives = 106/147 (72.11%), Query Frame = 2

Query:   23 MEALLSQFTFLSDQSLLDKSFDPSTIEDLMKLFEIESYKXXXXXXXXXXXXXXXXXXXXXXXXXHLDSVMESAMDXXXXXXXXXXXISRDEVESLVASGERARSMGNLMEKSAAIASKKYMEAALNSATASMKSAWKGISSGKVHPS 463
            MEALLSQFTFLSDQSL DKSFDPSTIEDLMKLFEIESYK                         HL+S MESAMD           ISRDEVESLV + E+AR+MGNLMEK A+IASKKY+EAALNSATASMKSAWKGISSGKVHPS
Sbjct:    1 MEALLSQFTFLSDQSLHDKSFDPSTIEDLMKLFEIESYKAWAAAELEQEREVEEAEDAMQEAEEHLNSAMESAMDEFRRFEEELERISRDEVESLVQTAEKARNMGNLMEKKASIASKKYIEAALNSATASMKSAWKGISSGKVHPS 147

[Close]

BLAST of GT620373 vs. TrEMBL
Match: C6SZW4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.103e-40
Identity = 92/147 (62.59%), Postives = 104/147 (70.75%), Query Frame = 2

Query:   23 MEALLSQFTFLSDQSLLDKSFDPSTIEDLMKLFEIESYKXXXXXXXXXXXXXXXXXXXXXXXXXHLDSVMESAMDXXXXXXXXXXXISRDEVESLVASGERARSMGNLMEKSAAIASKKYMEAALNSATASMKSAWKGISSGKVHPS 463
            MEALLSQFTFLSDQ+L D++FDPSTIEDLMKLFEIESYK                         +LDS MESAMD           +S++E+E LV + ERAR MGNLMEK A+IASKKY+EAALNSATASMKSAWKG+SSGKVHPS
Sbjct:    1 MEALLSQFTFLSDQALQDENFDPSTIEDLMKLFEIESYKAWAAAELEQEKEVEEAEAGMEEAEEYLDSTMESAMDEFRRFEEELERMSKNEMEGLVQTAERARKMGNLMEKGASIASKKYIEAALNSATASMKSAWKGLSSGKVHPS 147

[Close]

BLAST of GT620373 vs. TrEMBL
Match: B9T7P0_RICCO (Putative uncharacterized protein (Fragment) OS=Ricinus communis GN=RCOM_0123650 PE=4 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.400e-37
Identity = 85/147 (57.82%), Postives = 101/147 (68.71%), Query Frame = 2

Query:   23 MEALLSQFTFLSDQSLLDKSFDPSTIEDLMKLFEIESYKXXXXXXXXXXXXXXXXXXXXXXXXXHLDSVMESAMDXXXXXXXXXXXISRDEVESLVASGERARSMGNLMEKSAAIASKKYMEAALNSATASMKSAWKGISSGKVHPS 463
            MEALLSQFT LS+Q+L DK FDPSTIEDLMKLFEIE+Y+                         +LDSVMESAMD           +++ E++SL  +GE AR MGN+MEK+A IASKKY+EAALN+ATASMKSAWKG+SS KVHPS
Sbjct:    9 MEALLSQFTLLSNQALQDKDFDPSTIEDLMKLFEIEAYRSWAAMELAQEKEVQEAEKAMDRAEDYLDSVMESAMDEFRRFEEEMERMAKAELDSLERTGETARKMGNVMEKAATIASKKYIEAALNTATASMKSAWKGLSSNKVHPS 155

[Close]

BLAST of GT620373 vs. TrEMBL
Match: A5BZL8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032381 PE=4 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.181e-34
Identity = 81/147 (55.10%), Postives = 99/147 (67.35%), Query Frame = 2

Query:   23 MEALLSQFTFLSDQSLLDKSFDPSTIEDLMKLFEIESYKXXXXXXXXXXXXXXXXXXXXXXXXXHLDSVMESAMDXXXXXXXXXXXISRDEVESLVASGERARSMGNLMEKSAAIASKKYMEAALNSATASMKSAWKGISSGKVHPS 463
            MEALLSQFTFLS+Q+L DK+FDPSTIE+LMKLFE+E+YK                         +LDSVM+SAM+            S+ E +SLV + + AR MG LMEK+A IASKKY+EAA+NSAT++MK AWKGISS KVHPS
Sbjct:  410 MEALLSQFTFLSNQALSDKNFDPSTIEELMKLFELEAYKSWASLELEQQKEVEEAEISMKEAEAYLDSVMDSAMEEFRLFEEELERTSKAEYDSLVQTADNARKMGKLMEKAATIASKKYIEAAMNSATSTMKMAWKGISSKKVHPS 556

[Close]

BLAST of GT620373 vs. TrEMBL
Match: A5BJR0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027661 PE=4 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.181e-34
Identity = 81/147 (55.10%), Postives = 99/147 (67.35%), Query Frame = 2

Query:   23 MEALLSQFTFLSDQSLLDKSFDPSTIEDLMKLFEIESYKXXXXXXXXXXXXXXXXXXXXXXXXXHLDSVMESAMDXXXXXXXXXXXISRDEVESLVASGERARSMGNLMEKSAAIASKKYMEAALNSATASMKSAWKGISSGKVHPS 463
            MEALLSQFTFLS+Q+L DK+FDPSTIE+LMKLFE+E+YK                         +LDSVM+SAM+            S+ E +SLV + + AR MG LMEK+A IASKKY+EAA+NSAT++MK AWKGISS KVHPS
Sbjct:    1 MEALLSQFTFLSNQALSDKNFDPSTIEELMKLFELEAYKSWASLELEQQKEVEEAEISMKEAEAYLDSVMDSAMEEFRLFEEELERTSKAEYDSLVQTADNARKMGKLMEKAATIASKKYIEAAMNSATSTMKMAWKGISSKKVHPS 147

[Close]

BLAST of GT620373 vs. TrEMBL
Match: A9P7U2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_831745 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.632e-34
Identity = 80/147 (54.42%), Postives = 100/147 (68.03%), Query Frame = 2

Query:   23 MEALLSQFTFLSDQSLLDKSFDPSTIEDLMKLFEIESYKXXXXXXXXXXXXXXXXXXXXXXXXXHLDSVMESAMDXXXXXXXXXXXISRDEVESLVASGERARSMGNLMEKSAAIASKKYMEAALNSATASMKSAWKGISSGKVHPS 463
            MEALLSQFT LS+Q+  DK+FDPS+I+DL+KLFEIE+YK                         +LD+VME AMD           ++R+E+ESL  + E AR+MGNLMEK+A IAS KYMEAALNSA+ASMK+AWKG+S+ KVHPS
Sbjct:    1 MEALLSQFTLLSNQACQDKNFDPSSIDDLLKLFEIEAYKSWAAMELEQEKEVKQAEVAMQQAEDYLDTVMEDAMDEFRRFEVEMERMARNELESLEKTAESARNMGNLMEKAATIASTKYMEAALNSASASMKTAWKGLSAKKVHPS 147

[Close]

BLAST of GT620373 vs. TrEMBL
Match: B9N3U3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_671976 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.467e-33
Identity = 79/147 (53.74%), Postives = 95/147 (64.63%), Query Frame = 2

Query:   23 MEALLSQFTFLSDQSLLDKSFDPSTIEDLMKLFEIESYKXXXXXXXXXXXXXXXXXXXXXXXXXHLDSVMESAMDXXXXXXXXXXXISRDEVESLVASGERARSMGNLMEKSAAIASKKYMEAALNSATASMKSAWKGISSGKVHPS 463
            MEALL QFT LS+Q+  DK++DPS+ +DLMKLFEIE+YK                         +LDS MESAMD           ++  E+ESL  + E AR MGNL+EK+A  ASKKYMEAALNSATASMK+AWKG+SS KVHPS
Sbjct:    1 MEALLYQFTLLSNQACQDKNYDPSSTDDLMKLFEIEAYKSWVAMELEQEMEVKEAEVAVQQAEDYLDSDMESAMDEFRRFEVEMERMAMSELESLERTAESARKMGNLLEKAATFASKKYMEAALNSATASMKTAWKGLSSKKVHPS 147

[Close]

BLAST of GT620373 vs. TrEMBL
Match: Q8LER7_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.891e-24
Identity = 64/147 (43.54%), Postives = 83/147 (56.46%), Query Frame = 2

Query:   23 MEALLSQFTFLSDQSLLDKSFDPSTIEDLMKLFEIESYKXXXXXXXXXXXXXXXXXXXXXXXXXHLDSVMESAMDXXXXXXXXXXXISRDEVESLVASGERARSMGNLMEKSAAIASKKYMEAALNSATASMKSAWKGISSGKVHPS 463
            MEAL+  FT LSDQ+L+DK+FDPS IEDLM+LFE++SYK                          LD  ME  M+           +   E++ L    E AR  GNLMEK+A IA+K+++ AA+ SA ASM+SAWK  +  KVHPS
Sbjct:    1 MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLRQAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATIAAKRHIAAAMGSAAASMRSAWKTAAGNKVHPS 147

[Close]

BLAST of GT620373 vs. TrEMBL
Match: Q9C529_ARATH (Putative uncharacterized protein F23C21.1 OS=Arabidopsis thaliana GN=T7P1.2 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.469e-24
Identity = 63/147 (42.86%), Postives = 83/147 (56.46%), Query Frame = 2

Query:   23 MEALLSQFTFLSDQSLLDKSFDPSTIEDLMKLFEIESYKXXXXXXXXXXXXXXXXXXXXXXXXXHLDSVMESAMDXXXXXXXXXXXISRDEVESLVASGERARSMGNLMEKSAAIASKKYMEAALNSATASMKSAWKGISSGKVHPS 463
            MEAL+  FT LSDQ+L+DK+FDPS IEDLM+LFE++SYK                          LD  ME  M+           +   E++ L    E AR  GNLMEK+A +A+K+++ AA+ SA ASM+SAWK  +  KVHPS
Sbjct:    1 MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLREAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRHIAAAMGSAAASMRSAWKTAAGNKVHPS 147

[Close]

BLAST of GT620373 vs. TrEMBL
Match: D7KWN6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_893447 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.225e-24
Identity = 64/147 (43.54%), Postives = 83/147 (56.46%), Query Frame = 2

Query:   23 MEALLSQFTFLSDQSLLDKSFDPSTIEDLMKLFEIESYKXXXXXXXXXXXXXXXXXXXXXXXXXHLDSVMESAMDXXXXXXXXXXXISRDEVESLVASGERARSMGNLMEKSAAIASKKYMEAALNSATASMKSAWKGISSGKVHPS 463
            MEAL+  FT LSDQ+L+DK+FDPS IEDLM+LFE++SYK                          LD  ME  M+           +   E++ L    E AR  GNLMEK+A IA+K+++ AA+ SA ASM+SAWK  +  KVHPS
Sbjct:    1 MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEETLREAELELDLDMEWGMEEYRRTLEEMERMEAAELKELEDKAETARRTGNLMEKAATIAAKRHIAAAMGSAAASMRSAWKTAAGNKVHPS 147

[Close]

BLAST of GT620373 vs. TAIR peptide
Match: AT1G60870.1 (| Symbols: MEE9 | maternal effect embryo arrest 9 | chr1:22409712-22410227 FORWARD LENGTH=147)

HSP 1 Score: 115.546 bits (288), Expect = 1.916e-26
Identity = 63/147 (42.86%), Postives = 83/147 (56.46%), Query Frame = 2

Query:   23 MEALLSQFTFLSDQSLLDKSFDPSTIEDLMKLFEIESYKXXXXXXXXXXXXXXXXXXXXXXXXXHLDSVMESAMDXXXXXXXXXXXISRDEVESLVASGERARSMGNLMEKSAAIASKKYMEAALNSATASMKSAWKGISSGKVHPS 463
            MEAL+  FT LSDQ+L+DK+FDPS IEDLM+LFE++SYK                          LD  ME  M+           +   E++ L    E AR  GNLMEK+A +A+K+++ AA+ SA ASM+SAWK  +  KVHPS
Sbjct:    1 MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLREAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRHIAAAMGSAAASMRSAWKTAAGNKVHPS 147

The following BLAST results are available for this feature:

BLAST of GT620373 vs. TrEMBL
BLAST of GT620373 vs. TAIR peptide

BLAST of GT620373 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A2Q3U1_MEDTR	6.250e-44	68.03	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SZW4_SOYBN	1.103e-40	62.59	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9T7P0_RICCO	7.400e-37	57.82	Putative uncharacterized protein (Fragment) OS=Ric...	[more]
A5BZL8_VITVI	1.181e-34	55.10	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5BJR0_VITVI	1.181e-34	55.10	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A9P7U2_POPTR	2.632e-34	54.42	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9N3U3_POPTR	8.467e-33	53.74	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q8LER7_ARATH	1.891e-24	43.54	Putative uncharacterized protein OS=Arabidopsis th...	[more]
Q9C529_ARATH	2.469e-24	42.86	Putative uncharacterized protein F23C21.1 OS=Arabi...	[more]
D7KWN6_ARALY	3.225e-24	43.54	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of GT620373 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G60870.1	1.916e-26	42.86	\| Symbols: MEE9 \| maternal effect embryo arrest 9 ...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 51..61 score
None	No IPR available	SEG	seg	seg	coord: 43..67 score: NAcoord: 79..89 score
None	No IPR available	SEG	seg	seg	coord: 20..30 score
None	No IPR available	SEG	seg	seg	coord: 51..76 score: NAcoord: 78..103 score
None	No IPR available	SEG	seg	seg	coord: 73..82 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT620373 ID=GT620373; Name=GT620373; organism=Lens culinaris; type=EST; length=570bp
CTAACTTTGATAGATCTCAAAAATGGAAGCTCTTCTTTCTCAATTCACCT
TCCTCTCAGACCAATCTTTACTCGACAAATCCTTCGATCCCTCAACTATC
GAAGATCTAATGAAACTCTTCGAGATCGAATCCTACAAAGCCTGGGCAGC
CGCAGAACTCGAACAAGAACAAGAACTCGAAGAAACGGAGCACGCTATGC
AAGAAGCCGAGGAACATCTCGATTCCGTAATGGAAAGTGCGATGGACGAA
TTCAGAAGGTTTGAAGAAGAGATGGAGAGGATTTCGAGAGATGAAGTTGA
GAGTTTGGTTGCAAGCGGTGAGAGAGCAAGAAGTATGGGGAATTTGATGG
AGAAAAGTGCCGCTATTGCTTCTAAGAAGTATATGGAAGCTGCTTTGAAT
TCAGCTACTGCTTCTATGAAATCAGCTTGGAAAGGAATTTCTTCTGGAAA
GGTTCATCCATCTTGAAGATTTGCAATCCGTTTATGTATCTATTATCTAT
ATATCTATATGTGCCCAAATTTGCACTGAATCTAATTTACTAGTGAAAAA
TAATAACTGTTTTTCTTTAA

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