GT624272

EST Overview
NameGT624272
Unique NameGT624272
TypeEST
OrganismLens culinaris (lentil)
Sequence length809
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of GT624272 vs. TrEMBL
Match: D7SW43_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022210001 PE=4 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.802e-46
Identity = 96/114 (84.21%), Postives = 106/114 (92.98%), Query Frame = -3
Query:  466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807
            RQ++AFYNLFRQADRVEKLA I++RLE+GDLKLRVRALESERAFQRVA VQKT+ NAVAAGSLINLATIL LNSIRVPA  AY FCA FGFQ+LFGI+K+KKLD+RERLITGTA
Sbjct:  632 RQARAFYNLFRQADRVEKLAEIIQRLEKGDLKLRVRALESERAFQRVAAVQKTVGNAVAAGSLINLATILYLNSIRVPAIAAYVFCAFFGFQVLFGIIKVKKLDQRERLITGTA 745          
BLAST of GT624272 vs. TrEMBL
Match: Q9LV84_ARATH (ABC transporter-like OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.307e-43
Identity = 91/114 (79.82%), Postives = 102/114 (89.47%), Query Frame = -3
Query:  466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807
            RQSQAFYNLFRQADRVEKLA ++ERLEQGDLKLRVRALESERAFQRVA VQKT+ +AVAAGSL+NLATIL LNSI+ PATIAY  CA F  Q+L GI+K+KK D+RE+LITGTA
Sbjct:  682 RQSQAFYNLFRQADRVEKLAVVIERLEQGDLKLRVRALESERAFQRVAAVQKTVGSAVAAGSLVNLATILYLNSIKTPATIAYTVCAFFSLQVLIGIIKVKKFDQREKLITGTA 795          
BLAST of GT624272 vs. TrEMBL
Match: Q93Y08_ARATH (ABC transporter-like OS=Arabidopsis thaliana GN=At5g64940/ MXK3.17 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.307e-43
Identity = 91/114 (79.82%), Postives = 102/114 (89.47%), Query Frame = -3
Query:  466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807
            RQSQAFYNLFRQADRVEKLA ++ERLEQGDLKLRVRALESERAFQRVA VQKT+ +AVAAGSL+NLATIL LNSI+ PATIAY  CA F  Q+L GI+K+KK D+RE+LITGTA
Sbjct:  648 RQSQAFYNLFRQADRVEKLAVVIERLEQGDLKLRVRALESERAFQRVAAVQKTVGSAVAAGSLVNLATILYLNSIKTPATIAYTVCAFFSLQVLIGIIKVKKFDQREKLITGTA 761          
BLAST of GT624272 vs. TrEMBL
Match: D7MSL5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_919821 PE=4 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 5.139e-43
Identity = 89/114 (78.07%), Postives = 102/114 (89.47%), Query Frame = -3
Query:  466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807
            RQSQAFYNLFRQADRVEKLA ++ERLEQGDLKLRVRALESERAFQRVA VQKT+ +AVAAGSL+NLATIL LNS++ PATIAY  CA F  Q+L G++K+KK D+RE+LITGTA
Sbjct:  642 RQSQAFYNLFRQADRVEKLAVVIERLEQGDLKLRVRALESERAFQRVAAVQKTVGSAVAAGSLVNLATILYLNSLKTPATIAYTVCAFFSLQVLIGVIKVKKFDQREKLITGTA 755          
BLAST of GT624272 vs. TrEMBL
Match: Q0WLU3_ARATH (ABC transporter-like (Fragment) OS=Arabidopsis thaliana GN=At5g64940 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.495e-42
Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = -3
Query:  466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807
            RQSQAFYNLFRQADRVEKLA ++ERLEQGDLK RVRALESERAFQRVA VQKT+ +AVAAGSL+NLATIL LNSI+ PATIAY  CA F  Q+L GI+K+KK D+RE+LITGTA
Sbjct:  337 RQSQAFYNLFRQADRVEKLAVVIERLEQGDLKPRVRALESERAFQRVAAVQKTVGSAVAAGSLVNLATILYLNSIKTPATIAYTVCAFFSLQVLIGIIKVKKFDQREKLITGTA 450          
BLAST of GT624272 vs. TrEMBL
Match: Q69S79_ORYSJ (Os02g0575500 protein OS=Oryza sativa subsp. japonica GN=P0703B01.21-1 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.953e-42
Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = -3
Query:  466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807
            RQS+AFYNLFRQ DRVEKLA I+ERLEQGDLKLRVR LESERAFQRVA VQKTI   VAAGSL+NLAT+L LNSIR+PATIAY  CA FG Q+L G++K+KKLD++ERLITGTA
Sbjct:  650 RQSRAFYNLFRQPDRVEKLAQIIERLEQGDLKLRVRTLESERAFQRVAAVQKTIGYGVAAGSLVNLATVLYLNSIRLPATIAYSLCAFFGLQVLVGLLKVKKLDQQERLITGTA 763          
BLAST of GT624272 vs. TrEMBL
Match: Q69S72_ORYSJ (Putative ABC transporter OS=Oryza sativa subsp. japonica GN=P0703B01.21-2 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.953e-42
Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = -3
Query:  466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807
            RQS+AFYNLFRQ DRVEKLA I+ERLEQGDLKLRVR LESERAFQRVA VQKTI   VAAGSL+NLAT+L LNSIR+PATIAY  CA FG Q+L G++K+KKLD++ERLITGTA
Sbjct:  260 RQSRAFYNLFRQPDRVEKLAQIIERLEQGDLKLRVRTLESERAFQRVAAVQKTIGYGVAAGSLVNLATVLYLNSIRLPATIAYSLCAFFGLQVLVGLLKVKKLDQQERLITGTA 373          
BLAST of GT624272 vs. TrEMBL
Match: B8AEB5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07774 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.953e-42
Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = -3
Query:  466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807
            RQS+AFYNLFRQ DRVEKLA I+ERLEQGDLKLRVR LESERAFQRVA VQKTI   VAAGSL+NLAT+L LNSIR+PATIAY  CA FG Q+L G++K+KKLD++ERLITGTA
Sbjct:  650 RQSRAFYNLFRQPDRVEKLAQIIERLEQGDLKLRVRTLESERAFQRVAAVQKTIGYGVAAGSLVNLATVLYLNSIRLPATIAYSLCAFFGLQVLVGLLKVKKLDQQERLITGTA 763          
BLAST of GT624272 vs. TrEMBL
Match: B9H598_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_207650 PE=4 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.266e-41
Identity = 88/114 (77.19%), Postives = 102/114 (89.47%), Query Frame = -3
Query:  466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807
            RQS+AF+NLFRQADRV+KLA  ++RLEQGDLKLRVR LE+ERAFQRVA VQKT+ +AVAAGSLINLATIL LNSIRVPAT A   CA F FQ+LFGI+K+K+LD++ERLITGTA
Sbjct:  514 RQSRAFHNLFRQADRVQKLAETIQRLEQGDLKLRVRTLEAERAFQRVAAVQKTVGSAVAAGSLINLATILFLNSIRVPATAASILCAFFSFQVLFGIIKVKRLDQQERLITGTA 627          
BLAST of GT624272 vs. TrEMBL
Match: A9PEK2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.266e-41
Identity = 88/114 (77.19%), Postives = 102/114 (89.47%), Query Frame = -3
Query:  466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807
            RQS+AF+NLFRQADRV+KLA  ++RLEQGDLKLRVR LE+ERAFQRVA VQKT+ +AVAAGSLINLATIL LNSIRVPAT A   CA F FQ+LFGI+K+K+LD++ERLITGTA
Sbjct:   85 RQSRAFHNLFRQADRVQKLAETIQRLEQGDLKLRVRTLEAERAFQRVAAVQKTVGSAVAAGSLINLATILFLNSIRVPATAASILCAFFSFQVLFGIIKVKRLDQQERLITGTA 198          
BLAST of GT624272 vs. TAIR peptide
Match: AT5G64940.2 (| Symbols: ATATH13, ATH13 | ABC2 homolog 13 | chr5:25949116-25953326 FORWARD LENGTH=761)

HSP 1 Score: 179.874 bits (455), Expect = 1.477e-45
Identity = 91/114 (79.82%), Postives = 102/114 (89.47%), Query Frame = -3
Query:  466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807
            RQSQAFYNLFRQADRVEKLA ++ERLEQGDLKLRVRALESERAFQRVA VQKT+ +AVAAGSL+NLATIL LNSI+ PATIAY  CA F  Q+L GI+K+KK D+RE+LITGTA
Sbjct:  648 RQSQAFYNLFRQADRVEKLAVVIERLEQGDLKLRVRALESERAFQRVAAVQKTVGSAVAAGSLVNLATILYLNSIKTPATIAYTVCAFFSLQVLIGIIKVKKFDQREKLITGTA 761          
BLAST of GT624272 vs. TAIR peptide
Match: AT5G64940.1 (| Symbols: ATATH13, ATH13, ATOSA1, OSA1 | ABC2 homolog 13 | chr5:25949116-25953326 FORWARD LENGTH=761)

HSP 1 Score: 179.874 bits (455), Expect = 1.477e-45
Identity = 91/114 (79.82%), Postives = 102/114 (89.47%), Query Frame = -3
Query:  466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807
            RQSQAFYNLFRQADRVEKLA ++ERLEQGDLKLRVRALESERAFQRVA VQKT+ +AVAAGSL+NLATIL LNSI+ PATIAY  CA F  Q+L GI+K+KK D+RE+LITGTA
Sbjct:  648 RQSQAFYNLFRQADRVEKLAVVIERLEQGDLKLRVRALESERAFQRVAAVQKTVGSAVAAGSLVNLATILYLNSIKTPATIAYTVCAFFSLQVLIGIIKVKKFDQREKLITGTA 761          
BLAST of GT624272 vs. TAIR peptide
Match: AT3G07700.3 (| Symbols: | Protein kinase superfamily protein | chr3:2459696-2463241 REVERSE LENGTH=724)

HSP 1 Score: 63.1586 bits (152), Expect = 2.015e-10
Identity = 32/96 (33.33%), Postives = 55/96 (57.29%), Query Frame = -3
Query:  478 RVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLI 765
            RV+++   ++ L+ GDLKLRVR LESERA ++   +Q      V  G+L+N+    S    ++ A  ++    IF   +L  + ++ KLD+ E++I
Sbjct:  629 RVQRIEEFVKELDSGDLKLRVRVLESERAARKATILQMATMYTVLGGTLLNIGVTFSNQGSQLVANGSFIGAGIFMLLVLRSMQRVNKLDKFEKMI 724          
BLAST of GT624272 vs. TAIR peptide
Match: AT3G07700.2 (| Symbols: | Protein kinase superfamily protein | chr3:2459696-2463241 REVERSE LENGTH=695)

HSP 1 Score: 63.1586 bits (152), Expect = 2.015e-10
Identity = 32/96 (33.33%), Postives = 55/96 (57.29%), Query Frame = -3
Query:  478 RVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLI 765
            RV+++   ++ L+ GDLKLRVR LESERA ++   +Q      V  G+L+N+    S    ++ A  ++    IF   +L  + ++ KLD+ E++I
Sbjct:  600 RVQRIEEFVKELDSGDLKLRVRVLESERAARKATILQMATMYTVLGGTLLNIGVTFSNQGSQLVANGSFIGAGIFMLLVLRSMQRVNKLDKFEKMI 695          
BLAST of GT624272 vs. TAIR peptide
Match: AT3G07700.1 (| Symbols: | Protein kinase superfamily protein | chr3:2459696-2463241 REVERSE LENGTH=695)

HSP 1 Score: 63.1586 bits (152), Expect = 2.015e-10
Identity = 32/96 (33.33%), Postives = 55/96 (57.29%), Query Frame = -3
Query:  478 RVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLI 765
            RV+++   ++ L+ GDLKLRVR LESERA ++   +Q      V  G+L+N+    S    ++ A  ++    IF   +L  + ++ KLD+ E++I
Sbjct:  600 RVQRIEEFVKELDSGDLKLRVRVLESERAARKATILQMATMYTVLGGTLLNIGVTFSNQGSQLVANGSFIGAGIFMLLVLRSMQRVNKLDKFEKMI 695          
The following BLAST results are available for this feature:
BLAST of GT624272 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7SW43_VITVI3.802e-4684.21Whole genome shotgun sequence of line PN40024, sca... [more]
Q9LV84_ARATH2.307e-4379.82ABC transporter-like OS=Arabidopsis thaliana PE=4 ... [more]
Q93Y08_ARATH2.307e-4379.82ABC transporter-like OS=Arabidopsis thaliana GN=At... [more]
D7MSL5_ARALY5.139e-4378.07Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q0WLU3_ARATH1.495e-4278.95ABC transporter-like (Fragment) OS=Arabidopsis tha... [more]
Q69S79_ORYSJ1.953e-4278.95Os02g0575500 protein OS=Oryza sativa subsp. japoni... [more]
Q69S72_ORYSJ1.953e-4278.95Putative ABC transporter OS=Oryza sativa subsp. ja... [more]
B8AEB5_ORYSI1.953e-4278.95Putative uncharacterized protein OS=Oryza sativa s... [more]
B9H598_POPTR1.266e-4177.19Predicted protein (Fragment) OS=Populus trichocarp... [more]
A9PEK2_POPTR1.266e-4177.19Putative uncharacterized protein OS=Populus tricho... [more]
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BLAST of GT624272 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G64940.21.477e-4579.82| Symbols: ATATH13, ATH13 | ABC2 homolog 13 | chr5... [more]
AT5G64940.11.477e-4579.82| Symbols: ATATH13, ATH13, ATOSA1, OSA1 | ABC2 hom... [more]
AT3G07700.32.015e-1033.33| Symbols: | Protein kinase superfamily protein |... [more]
AT3G07700.22.015e-1033.33| Symbols: | Protein kinase superfamily protein |... [more]
AT3G07700.12.015e-1033.33| Symbols: | Protein kinase superfamily protein |... [more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT624272 ID=GT624272; Name=GT624272; organism=Lens culinaris; type=EST; length=809bp
GGTAAATACTTACACTTGAAATTTCATTGAACAATTTATGTACCTTGCAA
CAAGTATAGCTTCCTGATGTCAATTTTATTGGAAGCCATATCATACTATA
TAGTACTCAACAATTAATCCTATACTAATTCCTATATAATTTACTATTTA
CTGATACAGACATAGAAAAAACAATAATAATGTTACTTGACCCTGCGGAT
ATAACGAGGGAAGGAGAGGGAGTTCGTGTTATTGACAAAAATGTGACTAG
CCAATTGGCTACCTTGGTGTCTGATCCTTTAAGCAAAGAAATCAAATGAA
CAGAAGAAGCCTCCAATATAACTGCAACTTCCAGTTGGATTTTGTTGCAC
ACTGATGTCTTTCAAGATGTTGCATATTACGTTGAGCTCCTAATGGATGC
TCTTGAAGATTAACTTTTAACATGGTGTTAACTTGAGAAACATGTCCACC
CTGGTAGTTTGCTTATGCAGTCCCTGTAATCAACCGTTCTCGTTCGTCCA
ACTTCTTGATTTTCACAATGCCAAAGAGAATTTGAAAACCAAAGATCGCA
CAAAAGAAATATGCTATAGTGGCAGGCACCCTAATTGAATTGAGAGATAG
AATTGTTGCAAGATTTATTAGGCTCCCAGCAGCTACTGCATTAAAAATTG
TTTTCTGCACGGTCGCAACGCGTTGGAATGCTCTCTCAGATTCCAAAGCT
CGGACTCTAAGCTTTAGATCACCTTGCTCCAATCTCTCCATAATGCTGGC
CAGCTTTTCAACTCTGTCAGCCTGTCTAAATAAGTTGTAAAATGCTTGAG
ATTGTCTGT
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