GT624272
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT624272 vs. TrEMBL
Match: D7SW43_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022210001 PE=4 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 3.802e-46 Identity = 96/114 (84.21%), Postives = 106/114 (92.98%), Query Frame = -3 Query: 466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807 RQ++AFYNLFRQADRVEKLA I++RLE+GDLKLRVRALESERAFQRVA VQKT+ NAVAAGSLINLATIL LNSIRVPA AY FCA FGFQ+LFGI+K+KKLD+RERLITGTA Sbjct: 632 RQARAFYNLFRQADRVEKLAEIIQRLEKGDLKLRVRALESERAFQRVAAVQKTVGNAVAAGSLINLATILYLNSIRVPAIAAYVFCAFFGFQVLFGIIKVKKLDQRERLITGTA 745
BLAST of GT624272 vs. TrEMBL
Match: Q9LV84_ARATH (ABC transporter-like OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 2.307e-43 Identity = 91/114 (79.82%), Postives = 102/114 (89.47%), Query Frame = -3 Query: 466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807 RQSQAFYNLFRQADRVEKLA ++ERLEQGDLKLRVRALESERAFQRVA VQKT+ +AVAAGSL+NLATIL LNSI+ PATIAY CA F Q+L GI+K+KK D+RE+LITGTA Sbjct: 682 RQSQAFYNLFRQADRVEKLAVVIERLEQGDLKLRVRALESERAFQRVAAVQKTVGSAVAAGSLVNLATILYLNSIKTPATIAYTVCAFFSLQVLIGIIKVKKFDQREKLITGTA 795
BLAST of GT624272 vs. TrEMBL
Match: Q93Y08_ARATH (ABC transporter-like OS=Arabidopsis thaliana GN=At5g64940/ MXK3.17 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 2.307e-43 Identity = 91/114 (79.82%), Postives = 102/114 (89.47%), Query Frame = -3 Query: 466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807 RQSQAFYNLFRQADRVEKLA ++ERLEQGDLKLRVRALESERAFQRVA VQKT+ +AVAAGSL+NLATIL LNSI+ PATIAY CA F Q+L GI+K+KK D+RE+LITGTA Sbjct: 648 RQSQAFYNLFRQADRVEKLAVVIERLEQGDLKLRVRALESERAFQRVAAVQKTVGSAVAAGSLVNLATILYLNSIKTPATIAYTVCAFFSLQVLIGIIKVKKFDQREKLITGTA 761
BLAST of GT624272 vs. TrEMBL
Match: D7MSL5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_919821 PE=4 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 5.139e-43 Identity = 89/114 (78.07%), Postives = 102/114 (89.47%), Query Frame = -3 Query: 466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807 RQSQAFYNLFRQADRVEKLA ++ERLEQGDLKLRVRALESERAFQRVA VQKT+ +AVAAGSL+NLATIL LNS++ PATIAY CA F Q+L G++K+KK D+RE+LITGTA Sbjct: 642 RQSQAFYNLFRQADRVEKLAVVIERLEQGDLKLRVRALESERAFQRVAAVQKTVGSAVAAGSLVNLATILYLNSLKTPATIAYTVCAFFSLQVLIGVIKVKKFDQREKLITGTA 755
BLAST of GT624272 vs. TrEMBL
Match: Q0WLU3_ARATH (ABC transporter-like (Fragment) OS=Arabidopsis thaliana GN=At5g64940 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.495e-42 Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = -3 Query: 466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807 RQSQAFYNLFRQADRVEKLA ++ERLEQGDLK RVRALESERAFQRVA VQKT+ +AVAAGSL+NLATIL LNSI+ PATIAY CA F Q+L GI+K+KK D+RE+LITGTA Sbjct: 337 RQSQAFYNLFRQADRVEKLAVVIERLEQGDLKPRVRALESERAFQRVAAVQKTVGSAVAAGSLVNLATILYLNSIKTPATIAYTVCAFFSLQVLIGIIKVKKFDQREKLITGTA 450
BLAST of GT624272 vs. TrEMBL
Match: Q69S79_ORYSJ (Os02g0575500 protein OS=Oryza sativa subsp. japonica GN=P0703B01.21-1 PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.953e-42 Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = -3 Query: 466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807 RQS+AFYNLFRQ DRVEKLA I+ERLEQGDLKLRVR LESERAFQRVA VQKTI VAAGSL+NLAT+L LNSIR+PATIAY CA FG Q+L G++K+KKLD++ERLITGTA Sbjct: 650 RQSRAFYNLFRQPDRVEKLAQIIERLEQGDLKLRVRTLESERAFQRVAAVQKTIGYGVAAGSLVNLATVLYLNSIRLPATIAYSLCAFFGLQVLVGLLKVKKLDQQERLITGTA 763
BLAST of GT624272 vs. TrEMBL
Match: Q69S72_ORYSJ (Putative ABC transporter OS=Oryza sativa subsp. japonica GN=P0703B01.21-2 PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.953e-42 Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = -3 Query: 466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807 RQS+AFYNLFRQ DRVEKLA I+ERLEQGDLKLRVR LESERAFQRVA VQKTI VAAGSL+NLAT+L LNSIR+PATIAY CA FG Q+L G++K+KKLD++ERLITGTA Sbjct: 260 RQSRAFYNLFRQPDRVEKLAQIIERLEQGDLKLRVRTLESERAFQRVAAVQKTIGYGVAAGSLVNLATVLYLNSIRLPATIAYSLCAFFGLQVLVGLLKVKKLDQQERLITGTA 373
BLAST of GT624272 vs. TrEMBL
Match: B8AEB5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07774 PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.953e-42 Identity = 90/114 (78.95%), Postives = 101/114 (88.60%), Query Frame = -3 Query: 466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807 RQS+AFYNLFRQ DRVEKLA I+ERLEQGDLKLRVR LESERAFQRVA VQKTI VAAGSL+NLAT+L LNSIR+PATIAY CA FG Q+L G++K+KKLD++ERLITGTA Sbjct: 650 RQSRAFYNLFRQPDRVEKLAQIIERLEQGDLKLRVRTLESERAFQRVAAVQKTIGYGVAAGSLVNLATVLYLNSIRLPATIAYSLCAFFGLQVLVGLLKVKKLDQQERLITGTA 763
BLAST of GT624272 vs. TrEMBL
Match: B9H598_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_207650 PE=4 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.266e-41 Identity = 88/114 (77.19%), Postives = 102/114 (89.47%), Query Frame = -3 Query: 466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807 RQS+AF+NLFRQADRV+KLA ++RLEQGDLKLRVR LE+ERAFQRVA VQKT+ +AVAAGSLINLATIL LNSIRVPAT A CA F FQ+LFGI+K+K+LD++ERLITGTA Sbjct: 514 RQSRAFHNLFRQADRVQKLAETIQRLEQGDLKLRVRTLEAERAFQRVAAVQKTVGSAVAAGSLINLATILFLNSIRVPATAASILCAFFSFQVLFGIIKVKRLDQQERLITGTA 627
BLAST of GT624272 vs. TrEMBL
Match: A9PEK2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.266e-41 Identity = 88/114 (77.19%), Postives = 102/114 (89.47%), Query Frame = -3 Query: 466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807 RQS+AF+NLFRQADRV+KLA ++RLEQGDLKLRVR LE+ERAFQRVA VQKT+ +AVAAGSLINLATIL LNSIRVPAT A CA F FQ+LFGI+K+K+LD++ERLITGTA Sbjct: 85 RQSRAFHNLFRQADRVQKLAETIQRLEQGDLKLRVRTLEAERAFQRVAAVQKTVGSAVAAGSLINLATILFLNSIRVPATAASILCAFFSFQVLFGIIKVKRLDQQERLITGTA 198
BLAST of GT624272 vs. TAIR peptide
Match: AT5G64940.2 (| Symbols: ATATH13, ATH13 | ABC2 homolog 13 | chr5:25949116-25953326 FORWARD LENGTH=761) HSP 1 Score: 179.874 bits (455), Expect = 1.477e-45 Identity = 91/114 (79.82%), Postives = 102/114 (89.47%), Query Frame = -3 Query: 466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807 RQSQAFYNLFRQADRVEKLA ++ERLEQGDLKLRVRALESERAFQRVA VQKT+ +AVAAGSL+NLATIL LNSI+ PATIAY CA F Q+L GI+K+KK D+RE+LITGTA Sbjct: 648 RQSQAFYNLFRQADRVEKLAVVIERLEQGDLKLRVRALESERAFQRVAAVQKTVGSAVAAGSLVNLATILYLNSIKTPATIAYTVCAFFSLQVLIGIIKVKKFDQREKLITGTA 761
BLAST of GT624272 vs. TAIR peptide
Match: AT5G64940.1 (| Symbols: ATATH13, ATH13, ATOSA1, OSA1 | ABC2 homolog 13 | chr5:25949116-25953326 FORWARD LENGTH=761) HSP 1 Score: 179.874 bits (455), Expect = 1.477e-45 Identity = 91/114 (79.82%), Postives = 102/114 (89.47%), Query Frame = -3 Query: 466 RQSQAFYNLFRQADRVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLITGTA 807 RQSQAFYNLFRQADRVEKLA ++ERLEQGDLKLRVRALESERAFQRVA VQKT+ +AVAAGSL+NLATIL LNSI+ PATIAY CA F Q+L GI+K+KK D+RE+LITGTA Sbjct: 648 RQSQAFYNLFRQADRVEKLAVVIERLEQGDLKLRVRALESERAFQRVAAVQKTVGSAVAAGSLVNLATILYLNSIKTPATIAYTVCAFFSLQVLIGIIKVKKFDQREKLITGTA 761
BLAST of GT624272 vs. TAIR peptide
Match: AT3G07700.3 (| Symbols: | Protein kinase superfamily protein | chr3:2459696-2463241 REVERSE LENGTH=724) HSP 1 Score: 63.1586 bits (152), Expect = 2.015e-10 Identity = 32/96 (33.33%), Postives = 55/96 (57.29%), Query Frame = -3 Query: 478 RVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLI 765 RV+++ ++ L+ GDLKLRVR LESERA ++ +Q V G+L+N+ S ++ A ++ IF +L + ++ KLD+ E++I Sbjct: 629 RVQRIEEFVKELDSGDLKLRVRVLESERAARKATILQMATMYTVLGGTLLNIGVTFSNQGSQLVANGSFIGAGIFMLLVLRSMQRVNKLDKFEKMI 724
BLAST of GT624272 vs. TAIR peptide
Match: AT3G07700.2 (| Symbols: | Protein kinase superfamily protein | chr3:2459696-2463241 REVERSE LENGTH=695) HSP 1 Score: 63.1586 bits (152), Expect = 2.015e-10 Identity = 32/96 (33.33%), Postives = 55/96 (57.29%), Query Frame = -3 Query: 478 RVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLI 765 RV+++ ++ L+ GDLKLRVR LESERA ++ +Q V G+L+N+ S ++ A ++ IF +L + ++ KLD+ E++I Sbjct: 600 RVQRIEEFVKELDSGDLKLRVRVLESERAARKATILQMATMYTVLGGTLLNIGVTFSNQGSQLVANGSFIGAGIFMLLVLRSMQRVNKLDKFEKMI 695
BLAST of GT624272 vs. TAIR peptide
Match: AT3G07700.1 (| Symbols: | Protein kinase superfamily protein | chr3:2459696-2463241 REVERSE LENGTH=695) HSP 1 Score: 63.1586 bits (152), Expect = 2.015e-10 Identity = 32/96 (33.33%), Postives = 55/96 (57.29%), Query Frame = -3 Query: 478 RVEKLASIMERLEQGDLKLRVRALESERAFQRVATVQKTIFNAVAAGSLINLATILSLNSIRVPATIAYFFCAIFGFQILFGIVKIKKLDERERLI 765 RV+++ ++ L+ GDLKLRVR LESERA ++ +Q V G+L+N+ S ++ A ++ IF +L + ++ KLD+ E++I Sbjct: 600 RVQRIEEFVKELDSGDLKLRVRVLESERAARKATILQMATMYTVLGGTLLNIGVTFSNQGSQLVANGSFIGAGIFMLLVLRSMQRVNKLDKFEKMI 695 The following BLAST results are available for this feature:
BLAST of GT624272 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT624272 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT624272 ID=GT624272; Name=GT624272; organism=Lens culinaris; type=EST; length=809bpback to top |