GT627875
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT627875 vs. TrEMBL
Match: Q6ZNE1_HUMAN (cDNA FLJ16186 fis, clone BRTHA2007060, moderately similar to EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 10 OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.179e-50 Identity = 109/176 (61.93%), Postives = 123/176 (69.89%), Query Frame = 1 Query: 1 MEEKDKEEAQAILQEAEKRFKRKGKKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEFNXXXXXXXXXXXXXXXXXXXXXDKMRKLKYYLQV 528 +EE++ EEAQA+LQEAEKR K+KGKKPII+G I+K+TLMELTL EQ R TMDYLERAKREEAAPLIEAAYQQRLVEER+L VELS+QRH GDL EKERL RMMGNKE+YQ RVVSHRQAEFN +KMRKLKYYL++ Sbjct: 624 IEERENEEAQALLQEAEKRIKKKGKKPIIEGDKITKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERLLHEREQQQEVELSKQRHEGDLKEKERLVRMMGNKEVYQARVVSHRQAEFNRLRREREERISRILQSRRQEREKMRKLKYYLKL 799
BLAST of GT627875 vs. TrEMBL
Match: D7U9Z4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_60.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031192001 PE=4 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.240e-37 Identity = 87/175 (49.71%), Postives = 111/175 (63.43%), Query Frame = 1 Query: 1 MEEKDKEEAQAILQEAEKRFKRKGKKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEFNXXXXXXXXXXXXXXXXXXXXXDKMRKLKYYLQ 525 +EE++ EEAQA+LQEAEKR K+KGKKPI +G ++K++LMEL L EQ R TMDYLERAKREEAAPLIEAA+QQRLVEE+ +E+SRQRH GDL EK RL RM+ K I+QERV++ RQAE++ + RK+ +YL+ Sbjct: 624 IEERELEEAQALLQEAEKRSKKKGKKPIAEGEKVTKQSLMELALSEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAFQQRLVEEKAFHEHEQQQEIEVSRQRHDGDLREKNRLVRMLDKKMIFQERVMNRRQAEYSRLRAEREERISQIIQSRKQEREAKRKMLFYLR 798
BLAST of GT627875 vs. TrEMBL
Match: D7LZK1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489971 PE=4 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.037e-37 Identity = 86/176 (48.86%), Postives = 109/176 (61.93%), Query Frame = 1 Query: 1 MEEKDKEEAQAILQEAEKRFKRKGKKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEFNXXXXXXXXXXXXXXXXXXXXXDKMRKLKYYLQV 528 +EEK+ EEAQA+L++ EKR K+ KKP++DG ++K+T+ME L EQ + TMDYLERAKREEAAPLIEAAYQ+RLVEER VELS++RH DL EK RL+RM+GNKEI+Q +V+S RQAEF+ D RK YYL + Sbjct: 624 IEEKELEEAQALLEDTEKRMKKGKKKPLLDGEKVTKQTVMERALTEQVKERKEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQRRLVEEREFYEREQQREVELSKERHESDLKEKNRLSRMLGNKEIFQAQVISRRQAEFDRIRTEREERISQIIRARKQERDIKRKQIYYLTI 799
BLAST of GT627875 vs. TrEMBL
Match: Q0WW10_ARATH (Putative uncharacterized protein At4g11420 OS=Arabidopsis thaliana GN=At4g11420 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.054e-36 Identity = 85/176 (48.30%), Postives = 109/176 (61.93%), Query Frame = 1 Query: 1 MEEKDKEEAQAILQEAEKRFKRKGKKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEFNXXXXXXXXXXXXXXXXXXXXXDKMRKLKYYLQV 528 +EEK+ EEAQA+L+E EKR K+ KKP++DG ++K+++ E L EQ + TMDYLERAKREEAAPLIEAAYQ+RLVEER VELS++RH DL EK RL+RM+GNKEI+Q +V+S RQAEF+ D RK YYL++ Sbjct: 624 IEEKELEEAQALLEETEKRMKKGKKKPLLDGEKVTKQSVKERALTEQLKERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQRRLVEEREFYEREQQREVELSKERHESDLKEKNRLSRMLGNKEIFQAQVISRRQAEFDRIRTEREERISKIIREKKQERDIKRKQIYYLKI 799
BLAST of GT627875 vs. TrEMBL
Match: B9RFF6_RICCO (Eukaryotic translation initiation factor 3 subunit, putative OS=Ricinus communis GN=RCOM_1434190 PE=4 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.209e-36 Identity = 82/144 (56.94%), Postives = 105/144 (72.92%), Query Frame = 1 Query: 1 MEEKDKEEAQAILQEAEKRFKRKG-KKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEFN 429 +E+++ EEAQA+L++ +KR KRKG KKPI++G ++K+T+ME L EQ R TMDYLERAKREEAAPLIEAA+Q+RLVEE++L ELSRQRH GDL EK RL+RM+ NK I+QERV+S RQAEF+ Sbjct: 624 IEQRELEEAQALLEDVDKRSKRKGGKKPILEGEKVTKQTIMERALSEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAFQRRLVEEKVLHESEQQLETELSRQRHDGDLREKNRLSRMLDNKIIFQERVMSRRQAEFD 767
BLAST of GT627875 vs. TrEMBL
Match: B9N4M8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_744583 PE=4 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.886e-36 Identity = 84/144 (58.33%), Postives = 103/144 (71.53%), Query Frame = 1 Query: 1 MEEKDKEEAQAILQEAEKRFKRKG-KKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEFN 429 +EE++ EEAQA+L+E EKR KRKG KKPI++G ++K+ LME L EQ R TMDYLERAKREEAAPLIEAA+QQRLVEE+ L +ELSRQRH GDL EK RL+RM+ NK I++ERV S R++EFN Sbjct: 624 IEERELEEAQALLEEHEKRSKRKGGKKPILEGEKVTKQILMERALSEQLRERQEMEKKLQKLVKTMDYLERAKREEAAPLIEAAFQQRLVEEKALHEHEQQQEIELSRQRHDGDLREKNRLSRMLENKIIFEERVKSRRESEFN 767
BLAST of GT627875 vs. TrEMBL
Match: B9I7A2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_894911 PE=4 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.283e-34 Identity = 86/144 (59.72%), Postives = 102/144 (70.83%), Query Frame = 1 Query: 1 MEEKDKEEAQAILQEAEKRFKRKG-KKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEFN 429 +EE++ EEAQA+L+E EKR KRKG KKPI++G V +K+ LME L EQ R TMDYLERAKREEAAPLIEAA+QQRLVEE+ L ELSRQRH GDL EK RL+RM+ NK I++ERV S R+AEFN Sbjct: 630 IEERELEEAQALLEEQEKRSKRKGGKKPILEGKV-TKQILMERALSEQLRERQEMEKKLQKLVKTMDYLERAKREEAAPLIEAAFQQRLVEEKALHEHEQQLETELSRQRHDGDLKEKYRLSRMLENKIIFEERVKSRREAEFN 772
BLAST of GT627875 vs. TrEMBL
Match: Q70Z43_ORYSA (Translation initiation factor 3 OS=Oryza sativa GN=eIF3a PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.723e-29 Identity = 76/175 (43.43%), Postives = 102/175 (58.29%), Query Frame = 1 Query: 7 EKDKEEAQAILQEAEKRF-KRKGKKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEFNXXXXXXXXXXXXXXXXXXXXXDKMRKLKYYLQV 528 EK+K EA+ +LQ+ K KR GKKP++ G V +K+ +MEL + EQ + MDYLERAKR+E APLIE A+Q+RL E+IL +ELS+Q HAGDL EK RL+RM+ +K I+QER+V R+AEF+ D +RKL YYL + Sbjct: 626 EKEKIEAEELLQKQIKEIAKRGGKKPVLQGEV-TKEAVMELAMNEQFKERQEMEKKLQKTGKQMDYLERAKRQEEAPLIEQAFQKRLEVEKILHEQEQLREIELSKQHHAGDLQEKNRLSRMLEHKNIFQERIVQRREAEFSRLKKERDERTSQLISSRKRERDTVRKLMYYLNL 799
BLAST of GT627875 vs. TrEMBL
Match: Q5ZEN1_ORYSJ (Os01g0120800 protein OS=Oryza sativa subsp. japonica GN=P0684C01.5-1 PE=4 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.723e-29 Identity = 76/175 (43.43%), Postives = 102/175 (58.29%), Query Frame = 1 Query: 7 EKDKEEAQAILQEAEKRF-KRKGKKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEFNXXXXXXXXXXXXXXXXXXXXXDKMRKLKYYLQV 528 EK+K EA+ +LQ+ K KR GKKP++ G V +K+ +MEL + EQ + MDYLERAKR+E APLIE A+Q+RL E+IL +ELS+Q HAGDL EK RL+RM+ +K I+QER+V R+AEF+ D +RKL YYL + Sbjct: 626 EKEKIEAEELLQKQIKEIAKRGGKKPVLQGEV-TKEAVMELAMNEQFKERQEMEKKLQKTGKQMDYLERAKRQEEAPLIEQAFQKRLEVEKILHEQEQLREIELSKQHHAGDLQEKNRLSRMLEHKNIFQERIVQRREAEFSRLKKERDERTSQLISSRKRERDTVRKLMYYLNL 799
BLAST of GT627875 vs. TrEMBL
Match: B8ACZ5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00169 PE=4 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.723e-29 Identity = 76/175 (43.43%), Postives = 102/175 (58.29%), Query Frame = 1 Query: 7 EKDKEEAQAILQEAEKRF-KRKGKKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEFNXXXXXXXXXXXXXXXXXXXXXDKMRKLKYYLQV 528 EK+K EA+ +LQ+ K KR GKKP++ G V +K+ +MEL + EQ + MDYLERAKR+E APLIE A+Q+RL E+IL +ELS+Q HAGDL EK RL+RM+ +K I+QER+V R+AEF+ D +RKL YYL + Sbjct: 626 EKEKIEAEELLQKQIKEIAKRGGKKPVLQGEV-TKEAVMELAMNEQFKERQEMEKKLQKTGKQMDYLERAKRQEEAPLIEQAFQKRLEVEKILHEQEQLREIELSKQHHAGDLQEKNRLSRMLEHKNIFQERIVQRREAEFSRLKKERDERTSQLISSRKRERDTVRKLMYYLNL 799
BLAST of GT627875 vs. SwissProt
Match: EIF3A_ARATH (Eukaryotic translation initiation factor 3 subunit A OS=Arabidopsis thaliana GN=TIF3A1 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.099e-37 Identity = 85/176 (48.30%), Postives = 109/176 (61.93%), Query Frame = 1 Query: 1 MEEKDKEEAQAILQEAEKRFKRKGKKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEFNXXXXXXXXXXXXXXXXXXXXXDKMRKLKYYLQV 528 +EEK+ EEAQA+L+E EKR K+ KKP++DG ++K+++ E L EQ + TMDYLERAKREEAAPLIEAAYQ+RLVEER VELS++RH DL EK RL+RM+GNKEI+Q +V+S RQAEF+ D RK YYL++ Sbjct: 624 IEEKELEEAQALLEETEKRMKKGKKKPLLDGEKVTKQSVKERALTEQLKERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQRRLVEEREFYEREQQREVELSKERHESDLKEKNRLSRMLGNKEIFQAQVISRRQAEFDRIRTEREERISKIIREKKQERDIKRKQIYYLKI 799
BLAST of GT627875 vs. SwissProt
Match: EIF3A_TOBAC (Eukaryotic translation initiation factor 3 subunit A OS=Nicotiana tabacum GN=TIF3A1 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.716e-35 Identity = 80/142 (56.34%), Postives = 100/142 (70.42%), Query Frame = 1 Query: 1 MEEKDKEEAQAILQEAEKRFKRKGKKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEF 426 +E+++ EEAQA+L EAEKR KRK KKP+++G ++KK +MEL L EQ R +MD+LERAKREEAAPLIE+A++QRL EE L +ELSRQRHAGDL EK RL RM+ NK I QE+VVS R+AEF Sbjct: 624 IEDRELEEAQALLHEAEKRSKRK-KKPVLEGEKMTKKVIMELALNEQLRERQEMEKKLLKFAKSMDHLERAKREEAAPLIESAFKQRLAEEAALHEREQQQEIELSRQRHAGDLEEKRRLARMLENKRILQEKVVSSREAEF 764
BLAST of GT627875 vs. SwissProt
Match: EIF3A_MAIZE (Eukaryotic translation initiation factor 3 subunit A OS=Zea mays GN=TIF3A1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.667e-26 Identity = 69/176 (39.20%), Postives = 96/176 (54.55%), Query Frame = 1 Query: 1 MEEKDKEEAQAILQEAEKRFKRKGKKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEFNXXXXXXXXXXXXXXXXXXXXXDKMRKLKYYLQV 528 +EEK+K EA+ +L++ K GKK ++ G ++K+ MEL EQ + TMDYLERAKR+E APLIE A+Q+RL EE+IL +ELS+Q HA DL EK RL+RM+ +K QER++ R AEF + +RKL +YL + Sbjct: 622 IEEKNKAEAKKMLEDLNKA----GKKHVVVEGELTKEAYMELARNEQLKERHEMEKKLQKFAKTMDYLERAKRQEEAPLIEQAFQKRLEEEKILHEQEQLREIELSKQHHASDLQEKNRLSRMLEHKNALQERIIQERAAEFGRLKKERDERMNRLISSRKHERETVRKLMFYLNL 793
BLAST of GT627875 vs. TAIR peptide
Match: AT4G11420.1 (| Symbols: EIF3A, ATEIF3A-1, EIF3A-1, ATTIF3A1, TIF3A1 | eukaryotic translation initiation factor 3A | chr4:6947834-6952053 REVERSE LENGTH=987) HSP 1 Score: 155.606 bits (392), Expect = 2.143e-38 Identity = 85/176 (48.30%), Postives = 109/176 (61.93%), Query Frame = 1 Query: 1 MEEKDKEEAQAILQEAEKRFKRKGKKPIIDGGVISKKTLMELTLIEQHRXXXXXXXXXXXXXXTMDYLERAKREEAAPLIEAAYQQRLVEERILXXXXXXXXVELSRQRHAGDLNEKERLTRMMGNKEIYQERVVSHRQAEFNXXXXXXXXXXXXXXXXXXXXXDKMRKLKYYLQV 528 +EEK+ EEAQA+L+E EKR K+ KKP++DG ++K+++ E L EQ + TMDYLERAKREEAAPLIEAAYQ+RLVEER VELS++RH DL EK RL+RM+GNKEI+Q +V+S RQAEF+ D RK YYL++ Sbjct: 624 IEEKELEEAQALLEETEKRMKKGKKKPLLDGEKVTKQSVKERALTEQLKERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQRRLVEEREFYEREQQREVELSKERHESDLKEKNRLSRMLGNKEIFQAQVISRRQAEFDRIRTEREERISKIIREKKQERDIKRKQIYYLKI 799 The following BLAST results are available for this feature:
BLAST of GT627875 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT627875 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 3
BLAST of GT627875 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT627875 ID=GT627875; Name=GT627875; organism=Lens culinaris; type=EST; length=653bpback to top |