GT627009

EST Overview
NameGT627009
Unique NameGT627009
TypeEST
OrganismLens culinaris (lentil)
Sequence length564
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT627009 vs. TrEMBL
Match: B9REW7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1429410 PE=4 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.238e-44
Identity = 81/141 (57.45%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            AIY+ G G+PLF  +   TH + W LW+IH+L+L A YGFILF+  SKWRE+LP RP FY Y+V+MF  NA+                WLY  T++CYHA YLP L+ TFLADFF+EED  L+N YYSEMKDAGFFDADWE
Sbjct:  168 AIYMFGLGIPLFIDSNEQTHHMKWSLWVIHRLVLTAVYGFILFMYHSKWRERLPARPAFYKYIVIMFALNALALFACGLTGHGAGFGFWLYGITIVCYHAFYLPLLHKTFLADFFQEEDLHLENVYYSEMKDAGFFDADWE 308          
BLAST of GT627009 vs. TrEMBL
Match: B9MZL6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1112753 PE=4 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.112e-44
Identity = 78/141 (55.32%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            A+Y+ GFG+PLF  +   +H + W LW+IH+L+L A YG I+F+  SKWRE+LP RP FYNY+ +MFI NA+                WLY  T++CYHA YLP LYVTFLADFF+EE   L+N YYSEMKDAGFFD DW+
Sbjct:  165 AVYLFGFGIPLFIDSSDHSHRMKWSLWVIHRLVLTAVYGLIMFMYHSKWRERLPARPAFYNYIAIMFILNALALFACALTGHGAGFGYWLYGITIVCYHAFYLPLLYVTFLADFFQEEGLNLENVYYSEMKDAGFFDDDWD 305          
BLAST of GT627009 vs. TrEMBL
Match: D7TUW3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_30.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021968001 PE=4 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.603e-44
Identity = 80/140 (57.14%), Postives = 96/140 (68.57%), Query Frame = 1
Query:    4 IYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            IY+ GFGVPLF      +H + WGLW++HKL+L A YGFILF+  SKWRE+LP RP FY Y+ +M   NA+                WLY  T++ YHA YLP LY+TFLADFF+EED  L+N YYSEMKDAGFFDADWE
Sbjct:   88 IYLFGFGVPLFIDNNDQSHRVKWGLWVVHKLVLTAVYGFILFMYHSKWRERLPARPAFYKYITIMCCLNALALFACGLTGNGAGFGFWLYGLTMIFYHAFYLPLLYITFLADFFQEEDLHLENVYYSEMKDAGFFDADWE 227          
BLAST of GT627009 vs. TrEMBL
Match: A5BLR4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011755 PE=4 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.603e-44
Identity = 80/140 (57.14%), Postives = 96/140 (68.57%), Query Frame = 1
Query:    4 IYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            IY+ GFGVPLF      +H + WGLW++HKL+L A YGFILF+  SKWRE+LP RP FY Y+ +M   NA+                WLY  T++ YHA YLP LY+TFLADFF+EED  L+N YYSEMKDAGFFDADWE
Sbjct:  133 IYLFGFGVPLFIDNNDQSHRVKWGLWVVHKLVLTAVYGFILFMYHSKWRERLPARPAFYKYITIMCCLNALALFACGLTGNGAGFGFWLYGLTMIFYHAFYLPLLYITFLADFFQEEDLHLENVYYSEMKDAGFFDADWE 272          
BLAST of GT627009 vs. TrEMBL
Match: Q94AH1_ARATH (Putative uncharacterized protein At3g05010 OS=Arabidopsis thaliana GN=At3g05010 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.048e-43
Identity = 83/141 (58.87%), Postives = 93/141 (65.96%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            AIY+ GFGVPLF       H   WGLW+IHKLLLA  YG I F+  SKWRE+LP RP FY Y+ VM   N ++               WLY  T +CYHA YLP LYVTFLADFF+EED  L+N YYSEMKDAGFFDADWE
Sbjct:  160 AIYLFGFGVPLFIDNNEHIHKFKWGLWVIHKLLLAGIYGMIFFMYNSKWRERLPARPAFYKYITVMLALNGLSLFACALTANGAHFGLWLYGITSVCYHAFYLPLLYVTFLADFFQEEDLNLENVYYSEMKDAGFFDADWE 300          
BLAST of GT627009 vs. TrEMBL
Match: B9I847_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_240991 PE=4 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.335e-43
Identity = 79/141 (56.03%), Postives = 99/141 (70.21%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            A+Y+ GFG+PLF  +   +H + W LW IH+L+L A YG ILF+  SKWRE+LP RP FY Y+V+MFI NA++               WLY  T++CYHA YLP LYVTFLADFF+EED  L++ YYSEMKDAGFFD DW+
Sbjct:  141 ALYLFGFGIPLFIDSNEHSHHMKWSLWAIHRLVLTAIYGSILFMYHSKWRERLPARPAFYKYIVIMFILNALSLFASALTGHGTGFGYWLYSTTIVCYHAFYLPLLYVTFLADFFQEEDLHLESVYYSEMKDAGFFDDDWD 281          
BLAST of GT627009 vs. TrEMBL
Match: B6T9J0_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.203e-43
Identity = 81/140 (57.86%), Postives = 98/140 (70.00%), Query Frame = 1
Query:    4 IYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            IYV GFGVPLF  T   T    WGLWI+HKL+L   YG I+F+  S+WR++LP +P +YNYV VM + N I+               WLY+ T +CYH+LYLP LYVTFLADFF+EED LL+N YYSEMKDAGFFDADW+
Sbjct:  165 IYVFGFGVPLFIDTDQGTSG-KWGLWILHKLVLTGVYGLIVFMHHSRWRDRLPAKPAYYNYVCVMLLLNGISLFGCFLIASGAGFGLWLYNLTTVCYHSLYLPLLYVTFLADFFQEEDMLLENVYYSEMKDAGFFDADWD 303          
BLAST of GT627009 vs. TrEMBL
Match: B6SL94_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.203e-43
Identity = 81/140 (57.86%), Postives = 98/140 (70.00%), Query Frame = 1
Query:    4 IYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            IYV GFGVPLF  T   T    WGLWI+HKL+L   YG I+F+  S+WR++LP +P +YNYV VM + N I+               WLY+ T +CYH+LYLP LYVTFLADFF+EED LL+N YYSEMKDAGFFDADW+
Sbjct:  165 IYVFGFGVPLFIDTDQGTSG-KWGLWILHKLVLTGVYGLIVFMHHSRWRDRLPAKPAYYNYVCVMLLLNGISLFGCFVIASGAGFGLWLYNLTTVCYHSLYLPLLYVTFLADFFQEEDMLLENVYYSEMKDAGFFDADWD 303          
BLAST of GT627009 vs. TrEMBL
Match: Q8L8S4_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At5g27210 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 9.812e-42
Identity = 78/141 (55.32%), Postives = 94/141 (66.67%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            AI++ GFGVPLF     +  T  WGLWIIHKLLL   YG +  +  S+WREKLP RP FYNY+++MF   ++                WLY    +CYHALYLP LY+TFLADFF+EED  L+N YYSEMKDAGFFD+DWE
Sbjct:  157 AIFLFGFGVPLFIDNNENGKTFKWGLWIIHKLLLTGVYGMVFLMYNSRWREKLPARPAFYNYIIIMFALYSLYLVASAFTANNAHFGFWLYGIMSVCYHALYLPLLYITFLADFFQEEDLNLENVYYSEMKDAGFFDSDWE 297          
BLAST of GT627009 vs. TrEMBL
Match: Q8LKU0_SORBI (Putative expressed protein OS=Sorghum bicolor GN=170F8.10 PE=4 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.281e-41
Identity = 78/140 (55.71%), Postives = 96/140 (68.57%), Query Frame = 1
Query:    4 IYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            IYV GFGVPLF      T    WGLWI+HKL+L   YG I+F+  S+WR++LP +P +YNYV  M + N ++               WLY+ T +CYH+LYLP LYVTFLADFF+EED LL+N YYSEMKDAGFFDADW+
Sbjct:  133 IYVFGFGVPLFIDVDQGTGG-KWGLWILHKLVLTGVYGLIVFMHHSRWRDRLPAKPAYYNYVCAMLLLNGLSLFGCFLIASGAGFGLWLYNLTTVCYHSLYLPLLYVTFLADFFQEEDMLLENVYYSEMKDAGFFDADWD 271          
BLAST of GT627009 vs. TAIR peptide
Match: AT3G05010.1 (| Symbols: | Protein of unknown function, transmembrane-40 | chr3:1389603-1391462 FORWARD LENGTH=300)

HSP 1 Score: 179.874 bits (455), Expect = 8.297e-46
Identity = 83/141 (58.87%), Postives = 93/141 (65.96%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            AIY+ GFGVPLF       H   WGLW+IHKLLLA  YG I F+  SKWRE+LP RP FY Y+ VM   N ++               WLY  T +CYHA YLP LYVTFLADFF+EED  L+N YYSEMKDAGFFDADWE
Sbjct:  160 AIYLFGFGVPLFIDNNEHIHKFKWGLWVIHKLLLAGIYGMIFFMYNSKWRERLPARPAFYKYITVMLALNGLSLFACALTANGAHFGLWLYGITSVCYHAFYLPLLYVTFLADFFQEEDLNLENVYYSEMKDAGFFDADWE 300          
BLAST of GT627009 vs. TAIR peptide
Match: AT5G27210.1 (| Symbols: | Protein of unknown function, transmembrane-40 | chr5:9572333-9574075 REVERSE LENGTH=297)

HSP 1 Score: 173.326 bits (438), Expect = 7.766e-44
Identity = 78/141 (55.32%), Postives = 94/141 (66.67%), Query Frame = 1
Query:    1 AIYVLGFGVPLFNRTVGSTHTIMWGLWIIHKLLLAAAYGFILFVQFSKWREKLPPRPTFYNYVVVMFIFNAITXXXXXXXXXXXXXXNWLYDFTVLCYHALYLPFLYVTFLADFFREEDFLLDNAYYSEMKDAGFFDADWE 423
            AI++ GFGVPLF     +  T  WGLWIIHKLLL   YG +  +  S+WREKLP RP FYNY+++MF   ++                WLY    +CYHALYLP LY+TFLADFF+EED  L+N YYSEMKDAGFFD+DWE
Sbjct:  157 AIFLFGFGVPLFIDNNENGKTFKWGLWIIHKLLLTGVYGMVFLMYNSRWREKLPARPAFYNYIIIMFALYSLYLVASAFTANNAHFGFWLYGIMSVCYHALYLPLLYITFLADFFQEEDLNLENVYYSEMKDAGFFDSDWE 297          
The following BLAST results are available for this feature:
BLAST of GT627009 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9REW7_RICCO1.238e-4457.45Putative uncharacterized protein OS=Ricinus commun... [more]
B9MZL6_POPTR2.112e-4455.32Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TUW3_VITVI3.603e-4457.14Whole genome shotgun sequence of line PN40024, sca... [more]
A5BLR4_VITVI3.603e-4457.14Putative uncharacterized protein OS=Vitis vinifera... [more]
Q94AH1_ARATH1.048e-4358.87Putative uncharacterized protein At3g05010 OS=Arab... [more]
B9I847_POPTR2.335e-4356.03Predicted protein (Fragment) OS=Populus trichocarp... [more]
B6T9J0_MAIZE5.203e-4357.86Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B6SL94_MAIZE5.203e-4357.86Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q8L8S4_ARATH9.812e-4255.32Putative uncharacterized protein OS=Arabidopsis th... [more]
Q8LKU0_SORBI1.281e-4155.71Putative expressed protein OS=Sorghum bicolor GN=1... [more]
back to top
BLAST of GT627009 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G05010.18.297e-4658.87| Symbols: | Protein of unknown function, transme... [more]
AT5G27210.17.766e-4455.32| Symbols: | Protein of unknown function, transme... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018781Uncharacterised protein family, transmembrane-40PFAMPF10160Tmemb_40coord: 2..128
score: 4.7
NoneNo IPR availableSEGsegsegcoord: 74..87
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT627009 ID=GT627009; Name=GT627009; organism=Lens culinaris; type=EST; length=564bp
GCAATATATGTTCTTGGATTTGGTGTTCCGTTGTTCAATCGCACTGTTGG
AAGCACTCATACGATCATGTGGGGTTTGTGGATAATACATAAGCTATTGC
TTGCTGCAGCATATGGCTTCATTTTATTTGTACAATTCTCTAAATGGAGA
GAAAAACTTCCCCCCAGGCCAACTTTCTACAACTATGTTGTCGTAATGTT
TATATTCAACGCAATTACTCTCTTTGCTTGTGGGCTGGCAGGAATCGGTG
CGGGCCTTGGCAATTGGTTGTATGATTTTACTGTGCTGTGTTATCACGCC
CTATATCTTCCATTCCTTTATGTAACTTTTCTGGCAGATTTTTTCCGAGA
AGAAGACTTCCTTTTGGATAACGCGTATTATTCTGAGATGAAAGATGCCG
GATTCTTTGATGCCGACTGGGAATAACTCCCAAACAATTTGTACATGGAA
GGGATGACACACACATATAGTTCTATGCACTGTAAATATCTATACTTGAT
AAATTCCTAACTAAGTCAAAATGAAACTATGTTCCATGAACATCTTAATG
AAATGTTGAATCTA
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR018781TPRA1/CAND2/CAND8