GT624523
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT624523 vs. TrEMBL
Match: Q2HTW0_MEDTR (Homeodomain-related OS=Medicago truncatula GN=MtrDRAFT_AC149601g17v2 PE=4 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.464e-19 Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = -1 Query: 262 APNNKIQGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKV 411 A NNKIQGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWK+ Sbjct: 221 AQNNKIQGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKI 270
BLAST of GT624523 vs. TrEMBL
Match: D7TNB9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00020038001 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.588e-16 Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = -1 Query: 253 NNKIQGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKVRLD 405 NNKIQGTFLKKDDPKI ALMQQAELL+SLALKV+AEN DQSLENAWKV D Sbjct: 229 NNKIQGTFLKKDDPKITALMQQAELLSSLALKVNAENTDQSLENAWKVFQD 279
BLAST of GT624523 vs. TrEMBL
Match: B9S295_RICCO (Myb124, putative OS=Ricinus communis GN=RCOM_0697470 PE=4 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.486e-14 Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = -1 Query: 253 APNNKIQGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKVRLD 411 A N+KI+ TFL+KDDPKI ALMQQAELL+SLALKV+ EN DQSLENAWKV D Sbjct: 224 AENSKIEATFLRKDDPKITALMQQAELLSSLALKVNTENTDQSLENAWKVLQD 276
BLAST of GT624523 vs. TrEMBL
Match: B9HJT7_POPTR (Predicted protein OS=Populus trichocarpa GN=MYB213 PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.941e-14 Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = -1 Query: 253 NNKIQGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKVRLD 405 +++IQGTFLKKDDPKI ALMQQAELL+SLALKV EN DQSLENAWKV D Sbjct: 215 SSRIQGTFLKKDDPKITALMQQAELLSSLALKVSEENTDQSLENAWKVLQD 265
BLAST of GT624523 vs. TrEMBL
Match: B9HV98_POPTR (Predicted protein OS=Populus trichocarpa GN=MYB196 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.146e-13 Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = -1 Query: 253 NNKIQGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKVRLD 405 N+ IQ TFLKKDDPKI ALMQQAELL+SLALKV EN DQSLEN+WKV D Sbjct: 231 NSMIQRTFLKKDDPKITALMQQAELLSSLALKVSEENTDQSLENSWKVLQD 281
BLAST of GT624523 vs. TrEMBL
Match: Q6L4J6_SOLDE (Putative Myb-like DNA-binding protein OS=Solanum demissum GN=PGEC219.3 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.803e-13 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = -1 Query: 244 APNNKIQGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKVRLDSSQ 411 A +NK QGTFLK+DDPK ALMQQAELL+SLA+KV+ EN DQSLE+AWK+ D Q Sbjct: 230 ASDNKTQGTFLKQDDPKKQALMQQAELLSSLAMKVNTENTDQSLESAWKILQDFLQ 285
BLAST of GT624523 vs. TrEMBL
Match: Q5MG98_IPOBA (Putative Myb-like DNA-binding protein OS=Ipomoea batatas PE=4 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.154e-13 Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = -1 Query: 253 NNKIQGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKVRLD 405 +NK +GTFLKKDDPKI ALMQQAELL+SLALKV++EN DQSLENA KV D Sbjct: 150 SNKTEGTFLKKDDPKILALMQQAELLSSLALKVNSENTDQSLENACKVLED 200
BLAST of GT624523 vs. TrEMBL
Match: Q6L431_SOLDE (Myb-like DNA-binding protein, putative OS=Solanum demissum GN=SDM1_26t00007 PE=4 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.065e-12 Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = -1 Query: 259 APNNKIQGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKVR 411 A +NK QGTFLK+DDPK ALMQQAELL+SLA+KV+ EN DQSLE+AWK + Sbjct: 241 ASDNKTQGTFLKQDDPKKQALMQQAELLSSLAMKVNTENTDQSLESAWKFK 291
BLAST of GT624523 vs. TrEMBL
Match: Q9M9S7_ARATH (F14L17.12 protein OS=Arabidopsis thaliana GN=F14L17.12 PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.623e-11 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = -1 Query: 253 QGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKVRLD 393 +G FLKKDDPK+ ALMQQAELL+SLA KV+A+N +QS+ENAWKV D Sbjct: 221 EGMFLKKDDPKVTALMQQAELLSSLAQKVNADNTEQSMENAWKVLQD 267
BLAST of GT624523 vs. TrEMBL
Match: Q94FL6_ARATH (At1g14350 OS=Arabidopsis thaliana GN=MYB124 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.623e-11 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = -1 Query: 253 QGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKVRLD 393 +G FLKKDDPK+ ALMQQAELL+SLA KV+A+N +QS+ENAWKV D Sbjct: 221 EGMFLKKDDPKVTALMQQAELLSSLAQKVNADNTEQSMENAWKVLQD 267
BLAST of GT624523 vs. TAIR peptide
Match: AT1G14350.2 (| Symbols: FLP, MYB124 | Duplicated homeodomain-like superfamily protein | chr1:4908427-4910647 FORWARD LENGTH=436) HSP 1 Score: 72.4034 bits (176), Expect = 1.998e-13 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = -1 Query: 253 QGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKVRLD 393 +G FLKKDDPK+ ALMQQAELL+SLA KV+A+N +QS+ENAWKV D Sbjct: 221 EGMFLKKDDPKVTALMQQAELLSSLAQKVNADNTEQSMENAWKVLQD 267
BLAST of GT624523 vs. TAIR peptide
Match: AT1G14350.1 (| Symbols: FLP, AtMYB124, MYB124 | Duplicated homeodomain-like superfamily protein | chr1:4908427-4910647 FORWARD LENGTH=436) HSP 1 Score: 72.4034 bits (176), Expect = 1.998e-13 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = -1 Query: 253 QGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKVRLD 393 +G FLKKDDPK+ ALMQQAELL+SLA KV+A+N +QS+ENAWKV D Sbjct: 221 EGMFLKKDDPKVTALMQQAELLSSLAQKVNADNTEQSMENAWKVLQD 267
BLAST of GT624523 vs. TAIR peptide
Match: AT2G02820.2 (| Symbols: MYB88 | myb domain protein 88 | chr2:804716-807139 REVERSE LENGTH=484) HSP 1 Score: 69.3218 bits (168), Expect = 1.692e-12 Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = -1 Query: 253 QGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKVRLD 393 Q FLKKDD K+ ALMQQAELL+SLA KV+A+N DQS+ENAWKV D Sbjct: 242 QEVFLKKDDSKVTALMQQAELLSSLAQKVNADNTDQSMENAWKVLQD 288
BLAST of GT624523 vs. TAIR peptide
Match: AT2G02820.1 (| Symbols: MYB88, AtMYB88 | myb domain protein 88 | chr2:804890-807139 REVERSE LENGTH=455) HSP 1 Score: 69.3218 bits (168), Expect = 1.692e-12 Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = -1 Query: 253 QGTFLKKDDPKINALMQQAELLTSLALKVDAENMDQSLENAWKVRLD 393 Q FLKKDD K+ ALMQQAELL+SLA KV+A+N DQS+ENAWKV D Sbjct: 242 QEVFLKKDDSKVTALMQQAELLSSLAQKVNADNTDQSMENAWKVLQD 288 The following BLAST results are available for this feature:
BLAST of GT624523 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT624523 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT624523 ID=GT624523; Name=GT624523; organism=Lens culinaris; type=EST; length=588bpback to top |