GT624541

EST Overview
NameGT624541
Unique NameGT624541
TypeEST
OrganismLens culinaris (lentil)
Sequence length728
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Homology
BLAST of GT624541 vs. TrEMBL
Match: C6TKI9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.243e-35
Identity = 76/86 (88.37%), Postives = 83/86 (96.51%), Query Frame = 3
Query:  366 QIKAMAEDLQPLLADVRDSGLLKEVENLTRSLTQASDDLRRAHSSIMTPENTELIQKSIYTLIFTLKNIENVSSDILGFTGDEATR 623
            ++KAMAED+QPLL +VRDSGLLKEVENLTRSLTQA++DLRR HSSIMTPENTEL+QKSIYT IFTLKNIENVSSDILGFTGDEATR
Sbjct:  284 KMKAMAEDVQPLLTEVRDSGLLKEVENLTRSLTQATEDLRRVHSSIMTPENTELLQKSIYTFIFTLKNIENVSSDILGFTGDEATR 369          
BLAST of GT624541 vs. TrEMBL
Match: B9HGZ1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_763795 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.224e-35
Identity = 75/89 (84.27%), Postives = 87/89 (97.75%), Query Frame = 3
Query:  357 VVSQIKAMAEDLQPLLADVRDSGLLKEVENLTRSLTQASDDLRRAHSSIMTPENTELIQKSIYTLIFTLKNIENVSSDILGFTGDEATR 623
            ++++IKAM ED+QPLL++VRDSGLLKEVENLTRSLT AS+DLRRAH+SIMTPEN+ELIQKSIY+LIFTLKNIEN+SSDILGFTGDEATR
Sbjct:  268 LLTKIKAMTEDVQPLLSEVRDSGLLKEVENLTRSLTLASEDLRRAHTSIMTPENSELIQKSIYSLIFTLKNIENISSDILGFTGDEATR 356          
BLAST of GT624541 vs. TrEMBL
Match: B9T7S8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0126140 PE=4 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.434e-35
Identity = 75/89 (84.27%), Postives = 86/89 (96.63%), Query Frame = 3
Query:  357 VVSQIKAMAEDLQPLLADVRDSGLLKEVENLTRSLTQASDDLRRAHSSIMTPENTELIQKSIYTLIFTLKNIENVSSDILGFTGDEATR 623
            ++++I  MAED+QPLLA+VRDSGLLKEVE+LTRSLTQAS+DLRRAH+SIMTPENTELIQKSIY+LIFTLKNIEN+SSDILGFTGDE TR
Sbjct:  286 LLTKIHGMAEDVQPLLAEVRDSGLLKEVESLTRSLTQASEDLRRAHTSIMTPENTELIQKSIYSLIFTLKNIENISSDILGFTGDETTR 374          
BLAST of GT624541 vs. TrEMBL
Match: B9MY70_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_782272 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.682e-34
Identity = 72/89 (80.90%), Postives = 87/89 (97.75%), Query Frame = 3
Query:  357 VVSQIKAMAEDLQPLLADVRDSGLLKEVENLTRSLTQASDDLRRAHSSIMTPENTELIQKSIYTLIFTLKNIENVSSDILGFTGDEATR 623
            ++++IKAM ED+ PLL++VRDSGLLKEVE+LTR+L+QAS+DLRRAH+SIMTPENTELIQKSIY+LIFT+KNIEN+SSDILGFTGDEATR
Sbjct:  262 LLTKIKAMTEDIHPLLSEVRDSGLLKEVEDLTRNLSQASEDLRRAHTSIMTPENTELIQKSIYSLIFTMKNIENISSDILGFTGDEATR 350          
BLAST of GT624541 vs. TrEMBL
Match: D7U1W3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_102.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010853001 PE=4 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 5.177e-33
Identity = 71/91 (78.02%), Postives = 86/91 (94.51%), Query Frame = 3
Query:  351 RFVVSQIKAMAEDLQPLLADVRDSGLLKEVENLTRSLTQASDDLRRAHSSIMTPENTELIQKSIYTLIFTLKNIENVSSDILGFTGDEATR 623
            R ++++IKAMAED+QPL+ + RD+GLLKEVE+LT+SL QA+++LRR HSSI+TPENTELIQKSIYTLIFTLKNIEN+SSDILGFTGDEATR
Sbjct:  278 RPLLAKIKAMAEDVQPLVTEFRDTGLLKEVESLTKSLAQATEELRRVHSSILTPENTELIQKSIYTLIFTLKNIENISSDILGFTGDEATR 368          
BLAST of GT624541 vs. TrEMBL
Match: D7LAY4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_898445 PE=4 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.830e-33
Identity = 72/91 (79.12%), Postives = 85/91 (93.41%), Query Frame = 3
Query:  351 RFVVSQIKAMAEDLQPLLADVRDSGLLKEVENLTRSLTQASDDLRRAHSSIMTPENTELIQKSIYTLIFTLKNIENVSSDILGFTGDEATR 623
            R ++ +I+AMAED QPLL++ RDSGLLKEVE LTRSLTQASDDLR+ +SSIMTPENTELIQKSIYTL++TLKN+E++SSDILGFTGDEATR
Sbjct:  277 RPLLKKIQAMAEDAQPLLSEFRDSGLLKEVECLTRSLTQASDDLRKVNSSIMTPENTELIQKSIYTLVYTLKNVESISSDILGFTGDEATR 367          
BLAST of GT624541 vs. TrEMBL
Match: A5AJN1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036125 PE=4 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.967e-32
Identity = 70/85 (82.35%), Postives = 81/85 (95.29%), Query Frame = 3
Query:  369 IKAMAEDLQPLLADVRDSGLLKEVENLTRSLTQASDDLRRAHSSIMTPENTELIQKSIYTLIFTLKNIENVSSDILGFTGDEATR 623
            IKAMAED+QPL+ + RD+GLLKEVE+LT+SL QA+++LRR HSSI+TPENTELIQKSIYTLIFTLKNIEN+SSDILGFTGDEATR
Sbjct:  310 IKAMAEDVQPLVTEFRDTGLLKEVESLTKSLAQATEELRRVHSSILTPENTELIQKSIYTLIFTLKNIENISSDILGFTGDEATR 394          
BLAST of GT624541 vs. TrEMBL
Match: Q5JL23_ORYSJ (ABC-type transport system-like OS=Oryza sativa subsp. japonica GN=P0459B04.5 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.042e-25
Identity = 57/89 (64.04%), Postives = 79/89 (88.76%), Query Frame = 3
Query:  357 VVSQIKAMAEDLQPLLADVRDSGLLKEVENLTRSLTQASDDLRRAHSSIMTPENTELIQKSIYTLIFTLKNIENVSSDILGFTGDEATR 623
            ++S+I+A+AE++QPLL++VRDS L+K+VE + + L  AS DLRR  SS++TPENT+LI++SI+TLIFTLKNIE++SSDI GFTGD+ATR
Sbjct:  268 LLSRIEALAEEIQPLLSEVRDSDLVKDVEIIAKGLADASGDLRRLKSSMLTPENTDLIKQSIFTLIFTLKNIESISSDISGFTGDDATR 356          
BLAST of GT624541 vs. TrEMBL
Match: A2WZM3_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05413 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.042e-25
Identity = 57/89 (64.04%), Postives = 79/89 (88.76%), Query Frame = 3
Query:  357 VVSQIKAMAEDLQPLLADVRDSGLLKEVENLTRSLTQASDDLRRAHSSIMTPENTELIQKSIYTLIFTLKNIENVSSDILGFTGDEATR 623
            ++S+I+A+AE++QPLL++VRDS L+K+VE + + L  AS DLRR  SS++TPENT+LI++SI+TLIFTLKNIE++SSDI GFTGD+ATR
Sbjct:  268 LLSRIEALAEEIQPLLSEVRDSDLVKDVEIIAKGLADASGDLRRLKSSMLTPENTDLIKQSIFTLIFTLKNIESISSDISGFTGDDATR 356          
BLAST of GT624541 vs. TrEMBL
Match: B6TXI1_MAIZE (ABC-type transport system involved in resistance to organic solvents, periplasmic component OS=Zea mays PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.777e-25
Identity = 56/89 (62.92%), Postives = 77/89 (86.52%), Query Frame = 3
Query:  357 VVSQIKAMAEDLQPLLADVRDSGLLKEVENLTRSLTQASDDLRRAHSSIMTPENTELIQKSIYTLIFTLKNIENVSSDILGFTGDEATR 623
            ++++I+A+AE++QPLL++V DS LLK+VE + + L  AS DLRR  SS++TPENT+LI++SI+TLIFTLKNIE++SSDI GFTGDE TR
Sbjct:  260 LLTRIEALAEEMQPLLSEVNDSDLLKDVETIAKGLADASGDLRRLKSSMLTPENTDLIKQSIFTLIFTLKNIESISSDISGFTGDETTR 348          
BLAST of GT624541 vs. SwissProt
Match: TGD2_ARATH (Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic OS=Arabidopsis thaliana GN=TGD2 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.850e-34
Identity = 72/91 (79.12%), Postives = 85/91 (93.41%), Query Frame = 3
Query:  351 RFVVSQIKAMAEDLQPLLADVRDSGLLKEVENLTRSLTQASDDLRRAHSSIMTPENTELIQKSIYTLIFTLKNIENVSSDILGFTGDEATR 623
            R ++ +I+AMAED QPLL++ RDSGLLKEVE LTRSLTQASDDLR+ +SSIMTPENTELIQKSIYTL++TLKN+E++SSDILGFTGDEATR
Sbjct:  277 RPLLKKIQAMAEDAQPLLSEFRDSGLLKEVECLTRSLTQASDDLRKVNSSIMTPENTELIQKSIYTLVYTLKNVESISSDILGFTGDEATR 367          
BLAST of GT624541 vs. TAIR peptide
Match: AT3G20320.1 (| Symbols: TGD2 | trigalactosyldiacylglycerol2 | chr3:7087657-7089640 REVERSE LENGTH=381)

HSP 1 Score: 144.436 bits (363), Expect = 5.843e-35
Identity = 72/91 (79.12%), Postives = 85/91 (93.41%), Query Frame = 3
Query:  351 RFVVSQIKAMAEDLQPLLADVRDSGLLKEVENLTRSLTQASDDLRRAHSSIMTPENTELIQKSIYTLIFTLKNIENVSSDILGFTGDEATR 623
            R ++ +I+AMAED QPLL++ RDSGLLKEVE LTRSLTQASDDLR+ +SSIMTPENTELIQKSIYTL++TLKN+E++SSDILGFTGDEATR
Sbjct:  277 RPLLKKIQAMAEDAQPLLSEFRDSGLLKEVECLTRSLTQASDDLRKVNSSIMTPENTELIQKSIYTLVYTLKNVESISSDILGFTGDEATR 367          
The following BLAST results are available for this feature:
BLAST of GT624541 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TKI9_SOYBN3.243e-3588.37Putative uncharacterized protein OS=Glycine max PE... [more]
B9HGZ1_POPTR7.224e-3584.27Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9T7S8_RICCO9.434e-3584.27Putative uncharacterized protein OS=Ricinus commun... [more]
B9MY70_POPTR4.682e-3480.90Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7U1W3_VITVI5.177e-3378.02Whole genome shotgun sequence of line PN40024, sca... [more]
D7LAY4_ARALY8.830e-3379.12Putative uncharacterized protein OS=Arabidopsis ly... [more]
A5AJN1_VITVI1.967e-3282.35Putative uncharacterized protein OS=Vitis vinifera... [more]
Q5JL23_ORYSJ3.042e-2564.04ABC-type transport system-like OS=Oryza sativa sub... [more]
A2WZM3_ORYSI3.042e-2564.04Putative uncharacterized protein OS=Oryza sativa s... [more]
B6TXI1_MAIZE6.777e-2562.92ABC-type transport system involved in resistance t... [more]
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BLAST of GT624541 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
TGD2_ARATH5.850e-3479.12Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplast... [more]
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BLAST of GT624541 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G20320.15.843e-3579.12| Symbols: TGD2 | trigalactosyldiacylglycerol2 | c... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 12..28
score
NoneNo IPR availableSEGsegsegcoord: 99..113
score
NoneNo IPR availableSEGsegsegcoord: 7..20
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT624541 ID=GT624541; Name=GT624541; organism=Lens culinaris; type=EST; length=728bp
TTAATCAACCGAAATAATTCATAATTCCGTAATATTCGGAAATTCAACAA
CACACACCAACCATGTAACATAATACATGTGAAATTATCCAACATTAATA
ATTGCAAAATAAAATAAAGCAAAGCAATCAAAGTATCCCATCCCGAATGT
TACGAATATCAGAGCATGACCCACTACGGAACTATACTAGACTCCACGCA
TTTTCTTCTACTCAATTACTGCTCGTTACCGATGGCGAAGGTTTCGATTC
GGACGGAAGTGTGAACGTGAATTTCTCCTTGCTTTTGTAGAGATGACTTG
GTCATTTCTAGATCCACAATTGGTAGAAGATATTTGTGAGTGGAGTTGTA
AGGTTTGTTGTGAGTCAGATCAAAGCCATGGCTGAAGATCTTCAACCTTT
GCTGGCTGATGTCCGGGATAGCGGTCTGTTGAAGGAAGTTGAGAATTTAA
CTCGAAGCCTTACACAAGCCTCTGATGATTTGAGAAGGGCACATTCATCA
ATTATGACCCCTGAGAACACTGAACTGATCCAAAAGTCCATATACACTCT
CATATTCACCCTGAAAAACATTGAGAATGTTAGCTCTGATATTTTGGGCT
TCACTGGTGATGAAGCTACAAGAAAGAATTTGAAGCTACTAATTAAGTCT
CTCAGCAGGTTATTGTGAAGTCAAATTCCAATCATAGTAGGGCACAATAC
AAATAGTTGATTTCCAATGTTTTTCATC
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