GT625794

EST Overview
NameGT625794
Unique NameGT625794
TypeEST
OrganismLens culinaris (lentil)
Sequence length681
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT625794 vs. TrEMBL
Match: C6TLP5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.532e-39
Identity = 87/123 (70.73%), Postives = 96/123 (78.05%), Query Frame = -1
Query:  151 IQMDIHTHISIPSFTSHRFTSRNQTLXXXXXXSYFPNKFVCSKRD--ESQRNSDD--KGDKSSTDWDKAWSKFKKQGKKTLFSNFSADKYVSWNPRRSDFPLSEEVDPIKRTERSNLNFWNSP 507
            +QMD++THIS+PSF SHRF+S           SY P K VCS RD  ESQRN D+  KGDK STDWDKAWSKFKKQG K  FS FS DKYVSWNP+RS+FPLSEEVDPIKRTERSNL+FWNSP
Sbjct:    1 MQMDVYTHISLPSFISHRFSSSR--FQCSSLSSYSPLKPVCSNRDSKESQRNDDNNNKGDKFSTDWDKAWSKFKKQGGKKPFSKFS-DKYVSWNPKRSEFPLSEEVDPIKRTERSNLSFWNSP 120          
BLAST of GT625794 vs. TrEMBL
Match: Q10N24_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=Os03g0285100 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.787e-28
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = -1
Query:  151 CSKRDESQRNSDDKGDKSSTDWDKAWSKFKKQGKKTLFSNFSADKYVSWNPRRSDFPLSEEVDPIKRTERSNLNFWNSP 387
            CS+    +    DKGD SSTDWDKAWS FKK+GKKTLFS FS +KYVSWNPRRS++PLSEEVDPI+RTERSNL  W SP
Sbjct:   23 CSRGSPEKGGGSDKGDTSSTDWDKAWSTFKKKGKKTLFSEFSPNKYVSWNPRRSEYPLSEEVDPIRRTERSNLMLWTSP 101          
BLAST of GT625794 vs. TrEMBL
Match: B8ALJ5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11067 PE=4 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.787e-28
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = -1
Query:  151 CSKRDESQRNSDDKGDKSSTDWDKAWSKFKKQGKKTLFSNFSADKYVSWNPRRSDFPLSEEVDPIKRTERSNLNFWNSP 387
            CS+    +    DKGD SSTDWDKAWS FKK+GKKTLFS FS +KYVSWNPRRS++PLSEEVDPI+RTERSNL  W SP
Sbjct:   23 CSRGSPEKGGGSDKGDTSSTDWDKAWSTFKKKGKKTLFSEFSPNKYVSWNPRRSEYPLSEEVDPIRRTERSNLMLWTSP 101          
BLAST of GT625794 vs. TrEMBL
Match: D7TQ99_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025542001 PE=4 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.413e-26
Identity = 59/91 (64.84%), Postives = 66/91 (72.53%), Query Frame = -1
Query:  151 PNKFVCSKRDESQ-------RNSDDKGDKSSTDWDKAWSKFKKQGKKTLFSNFSADKYVSWNPRRSDFPLSEEVDPIKRTERSNLNFWNSP 402
            P K  C  R   Q        N +++GDK STDWDKAWS F+KQGKK LFS FS DKYV+WNPRRS++PLSEEVDPIKRTERSNL  W SP
Sbjct:   30 PLKPFCKGRGSQQPQQNGDANNDNNRGDKFSTDWDKAWSSFRKQGKKRLFSQFSPDKYVTWNPRRSNYPLSEEVDPIKRTERSNLMLWTSP 120          
BLAST of GT625794 vs. TrEMBL
Match: B6UCD1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.196e-25
Identity = 56/79 (70.89%), Postives = 66/79 (83.54%), Query Frame = -1
Query:  151 CSKRDESQRNSDDKGDKSSTDWDKAWSKFKKQGKKTLFSNFSADKYVSWNPRRSDFPLSEEVDPIKRTERSNLNFWNSP 387
            CS R    R+  DKG+ +S DWDKAW+KFKK+GK+TLFS+FS DKYV+WNPRRS++PLSEEVDPIKRTERSNL  W SP
Sbjct:   23 CS-RGSRDRSGSDKGE-TSADWDKAWAKFKKKGKRTLFSDFSPDKYVTWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 99          
BLAST of GT625794 vs. TrEMBL
Match: D7LUI5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_485723 PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.563e-25
Identity = 58/87 (66.67%), Postives = 67/87 (77.01%), Query Frame = -1
Query:  151 NKFVCSKRDESQRNSDDK----GDKSSTDWDKAWSKFKKQGKKTLFSNFSADKYVSWNPRRSDFPLSEEVDPIKRTERSNLNFWNSP 399
            ++F CSK +E  RN ++     GDKSSTDWDKAW  FKKQ KK+LFS F+ DKYV+WNP RS+F LSEEVDPIKRTERSNL  W SP
Sbjct:   29 SRFRCSK-NEPPRNGNESNGGGGDKSSTDWDKAWKNFKKQSKKSLFSQFNVDKYVTWNPPRSEFDLSEEVDPIKRTERSNLMLWTSP 114          
BLAST of GT625794 vs. TrEMBL
Match: Q9LFH1_ARATH (At3g53470 OS=Arabidopsis thaliana GN=F4P12_170 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.013e-24
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = -1
Query:  151 NKFVCSKRDESQRNSDDKG---DKSSTDWDKAWSKFKKQGKKTLFSNFSADKYVSWNPRRSDFPLSEEVDPIKRTERSNLNFWNSP 399
            ++F CS  +  ++ ++  G   DK+STDWDKAW  FKKQ KK+LFS F+ DKYV+WNP RS+F LSEEVDPIKRTERSNL  W SP
Sbjct:   26 SRFRCSNNEPPRKGNESNGGGGDKASTDWDKAWKNFKKQSKKSLFSQFNVDKYVTWNPPRSEFDLSEEVDPIKRTERSNLMLWTSP 111          
BLAST of GT625794 vs. TrEMBL
Match: Q3EAK4_ARATH (Putative uncharacterized protein At3g53470.2 OS=Arabidopsis thaliana GN=At3g53470 PE=4 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.013e-24
Identity = 55/87 (63.22%), Postives = 65/87 (74.71%), Query Frame = -1
Query:  151 NKFVCSK----RDESQRNSDDKGDKSSTDWDKAWSKFKKQGKKTLFSNFSADKYVSWNPRRSDFPLSEEVDPIKRTERSNLNFWNSP 399
            ++F CS     R  ++ N+   GDK+STDWDKAW  FKKQ KK+LFS F+ DKYV+WNP RS+F LSEEVDPIKRTERSNL  W SP
Sbjct:   26 SRFRCSNNEPPRKGNESNAGGGGDKASTDWDKAWKNFKKQSKKSLFSQFNVDKYVTWNPPRSEFDLSEEVDPIKRTERSNLMLWTSP 112          
BLAST of GT625794 vs. TrEMBL
Match: B9SGS5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0819840 PE=4 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.013e-24
Identity = 53/70 (75.71%), Postives = 58/70 (82.86%), Query Frame = -1
Query:  151 NSDDKGDKSSTDWDKAWSKFKKQGKKTLFSNFSADKYVSWNPRRSDFPLSEEVDPIKRTERSNLNFWNSP 360
            N+   G+K STDWDKAWS F+KQGKKTLFS FS +KYVSWNPRRS +PLSEEVDPIKR ERSNL  W SP
Sbjct:    6 NALASGEKFSTDWDKAWSNFRKQGKKTLFSGFSPNKYVSWNPRRSKYPLSEEVDPIKRAERSNLELWTSP 75          
BLAST of GT625794 vs. TrEMBL
Match: C5YN76_SORBI (Putative uncharacterized protein Sb07g024190 OS=Sorghum bicolor GN=Sb07g024190 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.849e-24
Identity = 53/79 (67.09%), Postives = 65/79 (82.28%), Query Frame = -1
Query:  151 CSKRDESQRNSDDKGDKSSTDWDKAWSKFKKQGKKTLFSNFSADKYVSWNPRRSDFPLSEEVDPIKRTERSNLNFWNSP 387
            CS R    ++  DKG+ +STDWDKAW+ FK +GK+TLFS+FS +KYV+WNPRRS++PLSEEVDPIKRTERSNL  W SP
Sbjct:   24 CS-RGSPDKSGSDKGE-TSTDWDKAWASFKNKGKRTLFSDFSPNKYVTWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 100          
BLAST of GT625794 vs. TAIR peptide
Match: AT3G53470.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:19822813-19823298 FORWARD LENGTH=135)

HSP 1 Score: 117.472 bits (293), Expect = 6.927e-27
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = -1
Query:  151 NKFVCSKRDESQRNSDDKG---DKSSTDWDKAWSKFKKQGKKTLFSNFSADKYVSWNPRRSDFPLSEEVDPIKRTERSNLNFWNSP 399
            ++F CS  +  ++ ++  G   DK+STDWDKAW  FKKQ KK+LFS F+ DKYV+WNP RS+F LSEEVDPIKRTERSNL  W SP
Sbjct:   26 SRFRCSNNEPPRKGNESNGGGGDKASTDWDKAWKNFKKQSKKSLFSQFNVDKYVTWNPPRSEFDLSEEVDPIKRTERSNLMLWTSP 111          
BLAST of GT625794 vs. TAIR peptide
Match: AT3G53470.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:19822813-19823298 FORWARD LENGTH=136)

HSP 1 Score: 117.472 bits (293), Expect = 6.927e-27
Identity = 55/87 (63.22%), Postives = 65/87 (74.71%), Query Frame = -1
Query:  151 NKFVCSK----RDESQRNSDDKGDKSSTDWDKAWSKFKKQGKKTLFSNFSADKYVSWNPRRSDFPLSEEVDPIKRTERSNLNFWNSP 399
            ++F CS     R  ++ N+   GDK+STDWDKAW  FKKQ KK+LFS F+ DKYV+WNP RS+F LSEEVDPIKRTERSNL  W SP
Sbjct:   26 SRFRCSNNEPPRKGNESNAGGGGDKASTDWDKAWKNFKKQSKKSLFSQFNVDKYVTWNPPRSEFDLSEEVDPIKRTERSNLMLWTSP 112          
The following BLAST results are available for this feature:
BLAST of GT625794 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TLP5_SOYBN5.532e-3970.73Putative uncharacterized protein OS=Glycine max PE... [more]
Q10N24_ORYSJ9.787e-2872.15Expressed protein OS=Oryza sativa subsp. japonica ... [more]
B8ALJ5_ORYSI9.787e-2872.15Putative uncharacterized protein OS=Oryza sativa s... [more]
D7TQ99_VITVI1.413e-2664.84Whole genome shotgun sequence of line PN40024, sca... [more]
B6UCD1_MAIZE1.196e-2570.89Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
D7LUI5_ARALY1.563e-2566.67Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9LFH1_ARATH1.013e-2461.63At3g53470 OS=Arabidopsis thaliana GN=F4P12_170 PE=... [more]
Q3EAK4_ARATH1.013e-2463.22Putative uncharacterized protein At3g53470.2 OS=Ar... [more]
B9SGS5_RICCO1.013e-2475.71Putative uncharacterized protein OS=Ricinus commun... [more]
C5YN76_SORBI3.849e-2467.09Putative uncharacterized protein Sb07g024190 OS=So... [more]
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BLAST of GT625794 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G53470.16.927e-2761.63| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT3G53470.26.927e-2763.22| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 51..57
score: NAcoord: 144..162
score
NoneNo IPR availableSEGsegsegcoord: 46..63
score
NoneNo IPR availableSEGsegsegcoord: 60..72
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT625794 ID=GT625794; Name=GT625794; organism=Lens culinaris; type=EST; length=681bp
AGCCATCAATTACATATGCATTATTTTTTTGAGACAAATATTTCCCACAT
TCAAATTGTATAGTTGAAAGAATTACTTGTTGATCGGTGCCTGAAGTGTG
TACAACAAAAGAAAAATGAGAATAATAAGTGCACCACCTAGAGTAAAAGT
AGGACTATTCCAGAAATTGAGGTTTGATCTCTCTGTTCTCTTAATAGGAT
CAACCTCTTCAGAAAGTGGGAAATCTGAACGCCTAGGATTCCAACTCACA
TACTTATCAGCAGAAAAATTTGAGAATAGAGTTTTCTTCCCTTGCTTCTT
GAACTTTGACCATGCCTTGTCCCAATCCGTTGAAGATTTATCACCCTTGT
CATCGCTGTTTCTTTGAGATTCGTCTCTTTTGGAACAGACAAATTTGTTG
GGGAAATAAGAAGAGAAAGAAGAAGATGATAAGGTTTGGTTTCTTGAAGT
GAAACGATGAGATGTAAAACTTGGTATTGAAATGTGTGTGTGAATATCCA
TTTGAATGGTGATGAAGATTGGAATTTGATTCTTCCTTTGATGAACTGAA
ACCGTGGAGGAAAGGTCTTCACCTCTTCCTTATCCTCTCCAAATCTTGTT
TGCTAGTTTTTTCTGTTTGATTTTATGTATCTGTCTTCTTAAGTACAATA
TTTTATGTTATTATTTTGGTATAACAGATCA
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