GT625862
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT625862 vs. TrEMBL
Match: A2Q1W0_MEDTR (Peptidyl-prolyl cis-trans isomerase, cyclophilin type OS=Medicago truncatula GN=MtrDRAFT_AC149129g19v2 PE=4 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 6.236e-66 Identity = 118/163 (72.39%), Postives = 131/163 (80.37%), Query Frame = 1 Query: 157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVF 645 MGRR NDSDFGKFTLL+FF+IGAISCSAVY FL MVFR + ++ E L EK+GFE GKCC GVEHLELWG+AV+WG+DF+VNSSE+CCRACK C DGR CLCNSWV+CGDRNACGPRFGECWLK QKDAL+PDR SG D VMWTSGFVF Sbjct: 1 MGRRQNDSDFGKFTLLIFFMIGAISCSAVYFFLTMVFRQSSTESVSTMYEVLDEKNGFE-------GKCCRGVEHLELWGDAVKWGDDFKVNSSEECCRACKDSCRGDGRGCLCNSWVWCGDRNACGPRFGECWLKRQKDALNPDRFGSG--DRVMWTSGFVF 154
BLAST of GT625862 vs. TrEMBL
Match: B9SKE8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0658480 PE=4 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.490e-48 Identity = 89/164 (54.27%), Postives = 115/164 (70.12%), Query Frame = 1 Query: 157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648 MGRRH DS+ G++ LL+ FL+ ISC VYL ++VFR +S + LV ++ D CCGG+EHLELWG+AV+WG+DF+VNSS++CC ACK +C + CLC+SWVFCG +++CG FGECWLK QKD+L PDR +SG D VMWTSG VFG Sbjct: 1 MGRRHTDSEVGRYALLILFLMATISCCLVYLCFSIVFRPTTSS---LDSGDLVLENTERD-----HNDCCGGIEHLELWGDAVKWGSDFKVNSSKECCMACKHMCSGEDGPCLCDSWVFCGHKSSCGSHFGECWLKKQKDSLEPDRRDSG--DQVMWTSGLVFG 154
BLAST of GT625862 vs. TrEMBL
Match: B9MV51_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_781338 PE=4 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.168e-46 Identity = 85/167 (50.90%), Postives = 114/167 (68.26%), Query Frame = 1 Query: 157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFR---ANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648 MGR+ + G++ LL F++G ISC VYL + +FR +N V++ + L + + +G CC G+EHLELWG+AV+WG++F+VNSS+ CC ACK +C D CLC+SWVFCGD+ ACG +FGECWLK QKD L PDR++SG D+VMWTSG VFG Sbjct: 1 MGRKQTVPELGRYGLLALFVMGTISCCMVYLCFSALFRPPNSNTEFVVSKVSDGLKSE--------DADGDCCRGIEHLELWGDAVKWGSEFKVNSSKACCLACKGMCSGDSGPCLCDSWVFCGDKQACGDKFGECWLKKQKDTLEPDRLDSG--DHVMWTSGIVFG 157
BLAST of GT625862 vs. TrEMBL
Match: D7SM10_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018309001 PE=4 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.557e-45 Identity = 87/165 (52.73%), Postives = 112/165 (67.88%), Query Frame = 1 Query: 157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFL-AMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648 MGRR DS+ G+ LL +GA SC VY L A + R ++SVL + D+L +E +CC G+EHLELWG+AV+WG DF+VNSSE+CCRACK++C CLC+SWVFCG+R ACG +FGECWLK QK + PDR +SG ++VMWTSG +FG Sbjct: 1 MGRRQTDSELGRCALLALLFLGATSCCVVYTLLSAGLRRTPISSVLDSIESG--------DVLGREEAQCCRGIEHLELWGDAVKWGADFKVNSSEECCRACKAMCSGVDGPCLCDSWVFCGNREACGAKFGECWLKKQKYSFYPDRRDSG--EHVMWTSGLIFG 155
BLAST of GT625862 vs. TrEMBL
Match: B9N2V4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580156 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.933e-44 Identity = 85/167 (50.90%), Postives = 112/167 (67.07%), Query Frame = 1 Query: 157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKE---GKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648 MGRR NDS+ +F L F L+G ISC+ VY L++V N++S + S FE L +E G CC G+E LELWG AV+WG+DF+ NSS++CC+ACK++C CLC++WVFCG++ ACG +FGECWLK QKD +PDR +G D V+WTSG VFG Sbjct: 1 MGRRQNDSEPSRFISLSFLLVGLISCALVYTVLSVVLNPNISS----------KGSNFESLALTEESSDGGCCRGIEKLELWGAAVKWGSDFKFNSSKECCQACKAMCTGIDGPCLCDTWVFCGNKKACGSKFGECWLKKQKDVFAPDRQEAG--DPVIWTSGIVFG 155
BLAST of GT625862 vs. TrEMBL
Match: B9SZ04_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0121040 PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.265e-42 Identity = 74/162 (45.68%), Postives = 110/162 (67.90%), Query Frame = 1 Query: 157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFV 642 MGRR ND + +FT L L+G ISC+ VY L+++ N+ + + +E F+ S+ +G+CC G+ +LELWG AV+WG++F+ NSS++CC+AC+ +C + CLC++WVFCG++ CG +FGECWLK QKD+L+PDR +G D V WTSG + Sbjct: 1 MGRRQNDQESSRFTFLTLLLVGFISCALVYTVLSLILNPNITFINSDSKYLAMEGKSFK---SKDDGECCRGINNLELWGPAVKWGSEFKFNSSKECCQACRDMCNGNDGPCLCDTWVFCGNKQTCGSKFGECWLKKQKDSLTPDRQEAG--DKVSWTSGLI 157
BLAST of GT625862 vs. TrEMBL
Match: A5BQG0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025993 PE=4 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.265e-42 Identity = 80/164 (48.78%), Postives = 112/164 (68.29%), Query Frame = 1 Query: 157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648 M R+ DS+ ++ L+ L+G SC+ VY FL++V R S ++ D + ++ S ++ SE CC G+E+LELWG AV+WG+DF+ NSS++CC ACK +C + CLC++WVFCG+R ACGP+FGECWLK QKD L+PDR SG + V WTSG +FG Sbjct: 1 MARKQIDSEPSRYASLILLLMGVASCTLVYAFLSVVLRPWADSPVSELDASALDGSSRAEVGSEG---CCRGIENLELWGPAVKWGSDFKFNSSKECCMACKGMCSGNDGPCLCDTWVFCGNREACGPKFGECWLKKQKDILAPDRQESGHK--VSWTSGIIFG 159
BLAST of GT625862 vs. TrEMBL
Match: Q93ZN3_ARATH (AT4g17070/dl4565c OS=Arabidopsis thaliana GN=At4g17070 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.681e-42 Identity = 80/164 (48.78%), Postives = 102/164 (62.20%), Query Frame = 1 Query: 157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648 M RR ND + G+FT + LIG ISC VY + V R + L E+ D + EG CC G+++LELWG AV+WG DF+ NSS+ CC+ACK +C + CLC+SWVFCG++ CG +FGECWLK QKD L PDR G + VMWTSG +FG Sbjct: 1 MPRRLNDGEPGRFTATVLLLIGLISCVIVYAVFSSVLRPSQDPTLVDSAVRFKEEPRDHDATEDGEGGCCRGIDNLELWGPAVKWGTDFKFNSSDGCCKACKVMCSGNDGPCLCDSWVFCGNKEDCGSKFGECWLKKQKDVLVPDR--QGGGEKVMWTSGLIFG 162
BLAST of GT625862 vs. TrEMBL
Match: D7MC30_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_658447 PE=4 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.280e-42 Identity = 82/166 (49.40%), Postives = 107/166 (64.46%), Query Frame = 1 Query: 157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEAL--VEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648 M RR ND + G+FT LIG ISC VY + + R T+ D A+ E+S D + + G CC G+++LELWG AV+WG DF+ NSS+ CC+ACK +C + CLC+SWVFCG+++ACG +FGECWLK QKD L PDR G + VMWTSG +FG Sbjct: 1 MPRRLNDGEPGRFTATALLLIGLISCVIVYAVFSTILRPQDP---TLVDSAVRFTEESRDHDAVEDGGGGCCRGIDNLELWGPAVKWGTDFKFNSSDGCCKACKVMCSGNDGPCLCDSWVFCGNKDACGSKFGECWLKKQKDVLMPDRQAGG--EKVMWTSGLIFG 161
BLAST of GT625862 vs. TrEMBL
Match: B9MUW2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589929 PE=4 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.071e-41 Identity = 83/167 (49.70%), Postives = 108/167 (64.67%), Query Frame = 1 Query: 157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKE---GKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648 MGRR NDS+ +F L F L G ISC+ VY L++ +N S + S FE L +E G CC GVE LELWG AV+WG+D + NSS++CC+ACK++C CLC++WVFCG++ ACG +FGECWLK QKD +PDR +G D V+WTSG +FG Sbjct: 1 MGRRQNDSEPSRFISLTFLLAGFISCALVYTVLSVALNSNTNS----------KGSNFEPLTLAEESNDGGCCRGVEKLELWGGAVKWGSDHKFNSSKECCQACKAMCTGIDGPCLCDTWVFCGNKKACGSKFGECWLKKQKDIYAPDRQEAG--DRVIWTSGLIFG 155
BLAST of GT625862 vs. TAIR peptide
Match: AT4G17070.1 (| Symbols: | peptidyl-prolyl cis-trans isomerases | chr4:9595523-9598066 REVERSE LENGTH=343) HSP 1 Score: 175.252 bits (443), Expect = 2.592e-44 Identity = 80/164 (48.78%), Postives = 102/164 (62.20%), Query Frame = 1 Query: 157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648 M RR ND + G+FT + LIG ISC VY + V R + L E+ D + EG CC G+++LELWG AV+WG DF+ NSS+ CC+ACK +C + CLC+SWVFCG++ CG +FGECWLK QKD L PDR G + VMWTSG +FG Sbjct: 1 MPRRLNDGEPGRFTATVLLLIGLISCVIVYAVFSSVLRPSQDPTLVDSAVRFKEEPRDHDATEDGEGGCCRGIDNLELWGPAVKWGTDFKFNSSDGCCKACKVMCSGNDGPCLCDSWVFCGNKEDCGSKFGECWLKKQKDVLVPDR--QGGGEKVMWTSGLIFG 162
BLAST of GT625862 vs. TAIR peptide
Match: AT4G33380.2 (| Symbols: | unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube. | chr4:16072064-16074605 FORWARD LENGTH=326) HSP 1 Score: 54.6842 bits (130), Expect = 5.107e-8 Identity = 37/112 (33.04%), Postives = 47/112 (41.96%), Query Frame = 1 Query: 364 CGGVEHLELWGEAVRWGNDFRVNSSEDCCRAC----KSLCPADGRRCLCNSWVFCGDRNAC------GPRFGECWLKHQKDALS--PDRVNSGSRDN-------VMWTSGFV 642 C H + G AVRWG S+ DCC+AC K P + R CN WV+C C + ECWLK+ + DR + R+N V W SG V Sbjct: 216 CNAELHTDYGGAAVRWGLTHHKESAADCCQACLDQAKRAKPGETR---CNIWVYCPSEFGCFSPDIYEHKHQECWLKYAEKPKQNFKDRYSETYRNNHPKAPSIVPWVSGVV 324
BLAST of GT625862 vs. TAIR peptide
Match: AT4G33380.1 (| Symbols: | unknown protein; Has 194 Blast hits to 189 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr4:16072064-16074605 FORWARD LENGTH=328) HSP 1 Score: 54.6842 bits (130), Expect = 5.107e-8 Identity = 37/112 (33.04%), Postives = 47/112 (41.96%), Query Frame = 1 Query: 364 CGGVEHLELWGEAVRWGNDFRVNSSEDCCRAC----KSLCPADGRRCLCNSWVFCGDRNAC------GPRFGECWLKHQKDALS--PDRVNSGSRDN-------VMWTSGFV 642 C H + G AVRWG S+ DCC+AC K P + R CN WV+C C + ECWLK+ + DR + R+N V W SG V Sbjct: 218 CNAELHTDYGGAAVRWGLTHHKESAADCCQACLDQAKRAKPGETR---CNIWVYCPSEFGCFSPDIYEHKHQECWLKYAEKPKQNFKDRYSETYRNNHPKAPSIVPWVSGVV 326 The following BLAST results are available for this feature:
BLAST of GT625862 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT625862 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT625862 ID=GT625862; Name=GT625862; organism=Lens culinaris; type=EST; length=648bpback to top |