GT625862

EST Overview
NameGT625862
Unique NameGT625862
TypeEST
OrganismLens culinaris (lentil)
Sequence length648
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT625862 vs. TrEMBL
Match: A2Q1W0_MEDTR (Peptidyl-prolyl cis-trans isomerase, cyclophilin type OS=Medicago truncatula GN=MtrDRAFT_AC149129g19v2 PE=4 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 6.236e-66
Identity = 118/163 (72.39%), Postives = 131/163 (80.37%), Query Frame = 1
Query:  157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVF 645
            MGRR NDSDFGKFTLL+FF+IGAISCSAVY FL MVFR +    ++   E L EK+GFE       GKCC GVEHLELWG+AV+WG+DF+VNSSE+CCRACK  C  DGR CLCNSWV+CGDRNACGPRFGECWLK QKDAL+PDR  SG  D VMWTSGFVF
Sbjct:    1 MGRRQNDSDFGKFTLLIFFMIGAISCSAVYFFLTMVFRQSSTESVSTMYEVLDEKNGFE-------GKCCRGVEHLELWGDAVKWGDDFKVNSSEECCRACKDSCRGDGRGCLCNSWVWCGDRNACGPRFGECWLKRQKDALNPDRFGSG--DRVMWTSGFVF 154          
BLAST of GT625862 vs. TrEMBL
Match: B9SKE8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0658480 PE=4 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.490e-48
Identity = 89/164 (54.27%), Postives = 115/164 (70.12%), Query Frame = 1
Query:  157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648
            MGRRH DS+ G++ LL+ FL+  ISC  VYL  ++VFR   +S   +    LV ++   D        CCGG+EHLELWG+AV+WG+DF+VNSS++CC ACK +C  +   CLC+SWVFCG +++CG  FGECWLK QKD+L PDR +SG  D VMWTSG VFG
Sbjct:    1 MGRRHTDSEVGRYALLILFLMATISCCLVYLCFSIVFRPTTSS---LDSGDLVLENTERD-----HNDCCGGIEHLELWGDAVKWGSDFKVNSSKECCMACKHMCSGEDGPCLCDSWVFCGHKSSCGSHFGECWLKKQKDSLEPDRRDSG--DQVMWTSGLVFG 154          
BLAST of GT625862 vs. TrEMBL
Match: B9MV51_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_781338 PE=4 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.168e-46
Identity = 85/167 (50.90%), Postives = 114/167 (68.26%), Query Frame = 1
Query:  157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFR---ANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648
            MGR+    + G++ LL  F++G ISC  VYL  + +FR   +N   V++   + L  +        + +G CC G+EHLELWG+AV+WG++F+VNSS+ CC ACK +C  D   CLC+SWVFCGD+ ACG +FGECWLK QKD L PDR++SG  D+VMWTSG VFG
Sbjct:    1 MGRKQTVPELGRYGLLALFVMGTISCCMVYLCFSALFRPPNSNTEFVVSKVSDGLKSE--------DADGDCCRGIEHLELWGDAVKWGSEFKVNSSKACCLACKGMCSGDSGPCLCDSWVFCGDKQACGDKFGECWLKKQKDTLEPDRLDSG--DHVMWTSGIVFG 157          
BLAST of GT625862 vs. TrEMBL
Match: D7SM10_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018309001 PE=4 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.557e-45
Identity = 87/165 (52.73%), Postives = 112/165 (67.88%), Query Frame = 1
Query:  157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFL-AMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648
            MGRR  DS+ G+  LL    +GA SC  VY  L A + R  ++SVL   +          D+L  +E +CC G+EHLELWG+AV+WG DF+VNSSE+CCRACK++C      CLC+SWVFCG+R ACG +FGECWLK QK +  PDR +SG  ++VMWTSG +FG
Sbjct:    1 MGRRQTDSELGRCALLALLFLGATSCCVVYTLLSAGLRRTPISSVLDSIESG--------DVLGREEAQCCRGIEHLELWGDAVKWGADFKVNSSEECCRACKAMCSGVDGPCLCDSWVFCGNREACGAKFGECWLKKQKYSFYPDRRDSG--EHVMWTSGLIFG 155          
BLAST of GT625862 vs. TrEMBL
Match: B9N2V4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580156 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.933e-44
Identity = 85/167 (50.90%), Postives = 112/167 (67.07%), Query Frame = 1
Query:  157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKE---GKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648
            MGRR NDS+  +F  L F L+G ISC+ VY  L++V   N++S          + S FE L   +E   G CC G+E LELWG AV+WG+DF+ NSS++CC+ACK++C      CLC++WVFCG++ ACG +FGECWLK QKD  +PDR  +G  D V+WTSG VFG
Sbjct:    1 MGRRQNDSEPSRFISLSFLLVGLISCALVYTVLSVVLNPNISS----------KGSNFESLALTEESSDGGCCRGIEKLELWGAAVKWGSDFKFNSSKECCQACKAMCTGIDGPCLCDTWVFCGNKKACGSKFGECWLKKQKDVFAPDRQEAG--DPVIWTSGIVFG 155          
BLAST of GT625862 vs. TrEMBL
Match: B9SZ04_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0121040 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.265e-42
Identity = 74/162 (45.68%), Postives = 110/162 (67.90%), Query Frame = 1
Query:  157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFV 642
            MGRR ND +  +FT L   L+G ISC+ VY  L+++   N+  + +      +E   F+   S+ +G+CC G+ +LELWG AV+WG++F+ NSS++CC+AC+ +C  +   CLC++WVFCG++  CG +FGECWLK QKD+L+PDR  +G  D V WTSG +
Sbjct:    1 MGRRQNDQESSRFTFLTLLLVGFISCALVYTVLSLILNPNITFINSDSKYLAMEGKSFK---SKDDGECCRGINNLELWGPAVKWGSEFKFNSSKECCQACRDMCNGNDGPCLCDTWVFCGNKQTCGSKFGECWLKKQKDSLTPDRQEAG--DKVSWTSGLI 157          
BLAST of GT625862 vs. TrEMBL
Match: A5BQG0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025993 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.265e-42
Identity = 80/164 (48.78%), Postives = 112/164 (68.29%), Query Frame = 1
Query:  157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648
            M R+  DS+  ++  L+  L+G  SC+ VY FL++V R    S ++  D + ++ S   ++ SE    CC G+E+LELWG AV+WG+DF+ NSS++CC ACK +C  +   CLC++WVFCG+R ACGP+FGECWLK QKD L+PDR  SG +  V WTSG +FG
Sbjct:    1 MARKQIDSEPSRYASLILLLMGVASCTLVYAFLSVVLRPWADSPVSELDASALDGSSRAEVGSEG---CCRGIENLELWGPAVKWGSDFKFNSSKECCMACKGMCSGNDGPCLCDTWVFCGNREACGPKFGECWLKKQKDILAPDRQESGHK--VSWTSGIIFG 159          
BLAST of GT625862 vs. TrEMBL
Match: Q93ZN3_ARATH (AT4g17070/dl4565c OS=Arabidopsis thaliana GN=At4g17070 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.681e-42
Identity = 80/164 (48.78%), Postives = 102/164 (62.20%), Query Frame = 1
Query:  157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648
            M RR ND + G+FT  +  LIG ISC  VY   + V R +    L        E+    D   + EG CC G+++LELWG AV+WG DF+ NSS+ CC+ACK +C  +   CLC+SWVFCG++  CG +FGECWLK QKD L PDR   G  + VMWTSG +FG
Sbjct:    1 MPRRLNDGEPGRFTATVLLLIGLISCVIVYAVFSSVLRPSQDPTLVDSAVRFKEEPRDHDATEDGEGGCCRGIDNLELWGPAVKWGTDFKFNSSDGCCKACKVMCSGNDGPCLCDSWVFCGNKEDCGSKFGECWLKKQKDVLVPDR--QGGGEKVMWTSGLIFG 162          
BLAST of GT625862 vs. TrEMBL
Match: D7MC30_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_658447 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.280e-42
Identity = 82/166 (49.40%), Postives = 107/166 (64.46%), Query Frame = 1
Query:  157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEAL--VEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648
            M RR ND + G+FT     LIG ISC  VY   + + R       T+ D A+   E+S   D + +  G CC G+++LELWG AV+WG DF+ NSS+ CC+ACK +C  +   CLC+SWVFCG+++ACG +FGECWLK QKD L PDR   G  + VMWTSG +FG
Sbjct:    1 MPRRLNDGEPGRFTATALLLIGLISCVIVYAVFSTILRPQDP---TLVDSAVRFTEESRDHDAVEDGGGGCCRGIDNLELWGPAVKWGTDFKFNSSDGCCKACKVMCSGNDGPCLCDSWVFCGNKDACGSKFGECWLKKQKDVLMPDRQAGG--EKVMWTSGLIFG 161          
BLAST of GT625862 vs. TrEMBL
Match: B9MUW2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589929 PE=4 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.071e-41
Identity = 83/167 (49.70%), Postives = 108/167 (64.67%), Query Frame = 1
Query:  157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKE---GKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648
            MGRR NDS+  +F  L F L G ISC+ VY  L++   +N  S          + S FE L   +E   G CC GVE LELWG AV+WG+D + NSS++CC+ACK++C      CLC++WVFCG++ ACG +FGECWLK QKD  +PDR  +G  D V+WTSG +FG
Sbjct:    1 MGRRQNDSEPSRFISLTFLLAGFISCALVYTVLSVALNSNTNS----------KGSNFEPLTLAEESNDGGCCRGVEKLELWGGAVKWGSDHKFNSSKECCQACKAMCTGIDGPCLCDTWVFCGNKKACGSKFGECWLKKQKDIYAPDRQEAG--DRVIWTSGLIFG 155          
BLAST of GT625862 vs. TAIR peptide
Match: AT4G17070.1 (| Symbols: | peptidyl-prolyl cis-trans isomerases | chr4:9595523-9598066 REVERSE LENGTH=343)

HSP 1 Score: 175.252 bits (443), Expect = 2.592e-44
Identity = 80/164 (48.78%), Postives = 102/164 (62.20%), Query Frame = 1
Query:  157 MGRRHNDSDFGKFTLLLFFLIGAISCSAVYLFLAMVFRANVASVLTMQDEALVEKSGFEDLLSEKEGKCCGGVEHLELWGEAVRWGNDFRVNSSEDCCRACKSLCPADGRRCLCNSWVFCGDRNACGPRFGECWLKHQKDALSPDRVNSGSRDNVMWTSGFVFG 648
            M RR ND + G+FT  +  LIG ISC  VY   + V R +    L        E+    D   + EG CC G+++LELWG AV+WG DF+ NSS+ CC+ACK +C  +   CLC+SWVFCG++  CG +FGECWLK QKD L PDR   G  + VMWTSG +FG
Sbjct:    1 MPRRLNDGEPGRFTATVLLLIGLISCVIVYAVFSSVLRPSQDPTLVDSAVRFKEEPRDHDATEDGEGGCCRGIDNLELWGPAVKWGTDFKFNSSDGCCKACKVMCSGNDGPCLCDSWVFCGNKEDCGSKFGECWLKKQKDVLVPDR--QGGGEKVMWTSGLIFG 162          
BLAST of GT625862 vs. TAIR peptide
Match: AT4G33380.2 (| Symbols: | unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube. | chr4:16072064-16074605 FORWARD LENGTH=326)

HSP 1 Score: 54.6842 bits (130), Expect = 5.107e-8
Identity = 37/112 (33.04%), Postives = 47/112 (41.96%), Query Frame = 1
Query:  364 CGGVEHLELWGEAVRWGNDFRVNSSEDCCRAC----KSLCPADGRRCLCNSWVFCGDRNAC------GPRFGECWLKHQKDALS--PDRVNSGSRDN-------VMWTSGFV 642
            C    H +  G AVRWG      S+ DCC+AC    K   P + R   CN WV+C     C        +  ECWLK+ +       DR +   R+N       V W SG V
Sbjct:  216 CNAELHTDYGGAAVRWGLTHHKESAADCCQACLDQAKRAKPGETR---CNIWVYCPSEFGCFSPDIYEHKHQECWLKYAEKPKQNFKDRYSETYRNNHPKAPSIVPWVSGVV 324          
BLAST of GT625862 vs. TAIR peptide
Match: AT4G33380.1 (| Symbols: | unknown protein; Has 194 Blast hits to 189 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr4:16072064-16074605 FORWARD LENGTH=328)

HSP 1 Score: 54.6842 bits (130), Expect = 5.107e-8
Identity = 37/112 (33.04%), Postives = 47/112 (41.96%), Query Frame = 1
Query:  364 CGGVEHLELWGEAVRWGNDFRVNSSEDCCRAC----KSLCPADGRRCLCNSWVFCGDRNAC------GPRFGECWLKHQKDALS--PDRVNSGSRDN-------VMWTSGFV 642
            C    H +  G AVRWG      S+ DCC+AC    K   P + R   CN WV+C     C        +  ECWLK+ +       DR +   R+N       V W SG V
Sbjct:  218 CNAELHTDYGGAAVRWGLTHHKESAADCCQACLDQAKRAKPGETR---CNIWVYCPSEFGCFSPDIYEHKHQECWLKYAEKPKQNFKDRYSETYRNNHPKAPSIVPWVSGVV 326          
The following BLAST results are available for this feature:
BLAST of GT625862 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A2Q1W0_MEDTR6.236e-6672.39Peptidyl-prolyl cis-trans isomerase, cyclophilin t... [more]
B9SKE8_RICCO4.490e-4854.27Putative uncharacterized protein OS=Ricinus commun... [more]
B9MV51_POPTR7.168e-4650.90Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7SM10_VITVI3.557e-4552.73Whole genome shotgun sequence of line PN40024, sca... [more]
B9N2V4_POPTR3.933e-4450.90Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SZ04_RICCO1.265e-4245.68Putative uncharacterized protein OS=Ricinus commun... [more]
A5BQG0_VITVI1.265e-4248.78Putative uncharacterized protein OS=Vitis vinifera... [more]
Q93ZN3_ARATH3.681e-4248.78AT4g17070/dl4565c OS=Arabidopsis thaliana GN=At4g1... [more]
D7MC30_ARALY6.280e-4249.40Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
B9MUW2_POPTR1.071e-4149.70Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of GT625862 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G17070.12.592e-4448.78| Symbols: | peptidyl-prolyl cis-trans isomerases... [more]
AT4G33380.25.107e-833.04| Symbols: | unknown protein; LOCATED IN: cellula... [more]
AT4G33380.15.107e-833.04| Symbols: | unknown protein; Has 194 Blast hits ... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 22..30
score
NoneNo IPR availableSEGsegsegcoord: 12..24
score
NoneNo IPR availableSEGsegsegcoord: 19..32
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT625862 ID=GT625862; Name=GT625862; organism=Lens culinaris; type=EST; length=648bp
TGACATTCATGGTGACGATGAAGCATTACTTTTGTTGCCAAATTCATCTT
AAACAAGAAAACAAAACAAGAAAAATCTACAAACCTCGTTCTTCTTATTG
TTCTTCTCATCACATGGTTCTTCGCGGACACCATTACTCATAATCTCAAA
ATCAAAATGGGTCGTCGCCACAACGACTCCGATTTCGGCAAATTCACGCT
TCTCCTTTTCTTTCTCATAGGTGCAATCTCCTGTTCCGCGGTATACCTTT
TCCTCGCAATGGTCTTTAGGGCGAACGTTGCGTCGGTGTTAACAATGCAG
GATGAGGCATTGGTTGAAAAGAGTGGTTTTGAGGATTTGTTGAGTGAGAA
AGAAGGAAAATGCTGTGGAGGGGTTGAGCATTTGGAACTGTGGGGTGAAG
CGGTTCGATGGGGTAATGATTTTAGGGTGAATTCTTCTGAGGATTGTTGT
AGGGCTTGTAAGAGTCTGTGTCCTGCTGATGGTCGACGTTGTTTGTGTAA
TTCTTGGGTTTTCTGTGGGGATAGGAATGCTTGTGGACCTAGATTTGGTG
AGTGTTGGCTAAAACATCAAAAAGATGCTTTAAGCCCAGATCGAGTAAAC
TCGGGCTCAAGAGATAATGTTATGTGGACTTCTGGATTTGTCTTTGGT
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