GT627824

EST Overview


Name	GT627824
Unique Name	GT627824
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	755

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT627824 vs. TrEMBL
Match: C6TFB9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.801e-58
Identity = 116/139 (83.45%), Postives = 127/139 (91.37%), Query Frame = 2

Query:   68 RNISHSVLSAGR-LSLSTVQRRCVVVCEAAPQKVDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAIEIHHGWYAPVPQES 481
            RN+SH + S G  LSLST QRR  VVCEAAP+KVDSAVKRARQAEKRR+YNKARKSEI+TRTKKVLEAL++LKKK DAQAEEILSIEK+IGEAYSIIDKAV+VGTLHRNTGANRKSRLARRKKA+EIHHGWY P P+ S
Sbjct:   25 RNLSHPLFSQGNCLSLSTAQRRASVVCEAAPKKVDSAVKRARQAEKRRVYNKARKSEIKTRTKKVLEALEVLKKKQDAQAEEILSIEKLIGEAYSIIDKAVRVGTLHRNTGANRKSRLARRKKAVEIHHGWYTPTPEAS 163

[Close]

BLAST of GT627824 vs. TrEMBL
Match: C6SV60_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 3.330e-54
Identity = 113/138 (81.88%), Postives = 123/138 (89.13%), Query Frame = 2

Query:   68 RNISHSVLSAGR-LSLSTVQRRCVVVCEAAPQK-VDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAIEIHHGWYAPVPQ 475
            RN+S    S G  LSLSTV RR  VVCEAAP+K VDSAVKRARQAEK R+YNKARKSEI+TRTKKVLEAL++LKKKSDAQAEEIL IEK+IGEAYSIIDKAV+VGTLHRNTGANRKSRLARRKKA+EIHHGWY P P+
Sbjct:   40 RNLSRPFFSKGNSLSLSTVLRRASVVCEAAPKKKVDSAVKRARQAEKHRVYNKARKSEIKTRTKKVLEALEVLKKKSDAQAEEILPIEKLIGEAYSIIDKAVRVGTLHRNTGANRKSRLARRKKAVEIHHGWYTPAPE 177

[Close]

BLAST of GT627824 vs. TrEMBL
Match: B9T1X1_RICCO (30S ribosomal protein S20, putative OS=Ricinus communis GN=RCOM_0108620 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.213e-49
Identity = 103/139 (74.10%), Postives = 117/139 (84.17%), Query Frame = 2

Query:   74 ISHSVLSAGRLSLSTVQRRC--VVVCEAAPQK-VDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAIEIHHGWYAPVPQES 481
            ISH V + G LS+S V+R     +VCEAAP+K  DSA KRARQAEKRR+Y+KA KSE+RTR KKVLEALD L+KKSDAQAEE+L IEK+I EAYS+IDKAVKVGTLHRNTGA RKSRLARRKKA+EIHHGWY P P E+
Sbjct:   44 ISHDVFNKGCLSMSIVKRPIGHSIVCEAAPKKRADSAAKRARQAEKRRIYHKAHKSEVRTRMKKVLEALDDLRKKSDAQAEEVLPIEKLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWYTPAPAEA 182

[Close]

BLAST of GT627824 vs. TrEMBL
Match: B9N1D8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_670039 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.147e-46
Identity = 96/138 (69.57%), Postives = 114/138 (82.61%), Query Frame = 2

Query:   71 NISHSVLSAGRLSLSTVQRRC---VVVCEAAPQK-VDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAIEIHHGWYAPVP 472
            ++SHS+ + G LS+ T QR      +VCE+ P+K  DSA KR RQAEKRR+YNKARKSE++TR KKVLEALD LKKK +AQ EE+L IEK+I EAYS+IDKA+KVGTLHRNTGA RKSRLARRKKA+EIHHGWY+P P
Sbjct:   39 SLSHSIFNKGCLSMRTTQRSIHNFSIVCESTPKKKADSAEKRTRQAEKRRVYNKARKSEVKTRMKKVLEALDDLKKKPEAQFEEVLPIEKLIAEAYSVIDKAIKVGTLHRNTGARRKSRLARRKKAVEIHHGWYSPAP 176

[Close]

BLAST of GT627824 vs. TrEMBL
Match: D7L400_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_897793 PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 9.406e-41
Identity = 88/127 (69.29%), Postives = 106/127 (83.46%), Query Frame = 2

Query:   92 SAGRLSLSTVQRRCVVVCEAAP--QKVDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAIEIHHGWYAP 466
            S+G L +    R+ ++VCEAA   +K DSA KRARQAEKRR+YNK++KSE RTR KKVLEAL+ LKKK+DAQ +EI+++EK+IGEAYS IDKAVKV  LH+NTGA RKSRLARRKKA+EIHHGWY P
Sbjct:   60 SSGNLWVQKPTRQ-LIVCEAAAPTKKADSAAKRARQAEKRRIYNKSKKSEARTRMKKVLEALEGLKKKTDAQPDEIVTVEKLIGEAYSAIDKAVKVKALHKNTGARRKSRLARRKKAVEIHHGWYVP 185

[Close]

BLAST of GT627824 vs. TrEMBL
Match: A9NV81_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.076e-36
Identity = 79/119 (66.39%), Postives = 93/119 (78.15%), Query Frame = 2

Query:  110 LSTVQRRCVVVCEAAPQKVDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAIEIHHGWYAP 466
            L+   RR VV   A  +K DSA KRARQAEKRR+YNK+ KSEI+TR +KV EAL  LKK +    E+++ IEK+I EAYS IDKAVKVGTLHRNTG +RKSRL+RRKKA+EIHHGWY P
Sbjct:   56 LAMPSRRPVVFVVAVSKKPDSAAKRARQAEKRRIYNKSHKSEIKTRMRKVFEALGKLKKATSPSPEDLIPIEKLIAEAYSSIDKAVKVGTLHRNTGGHRKSRLSRRKKAVEIHHGWYKP 174

[Close]

BLAST of GT627824 vs. TrEMBL
Match: A9NTN6_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.131e-36
Identity = 78/119 (65.55%), Postives = 92/119 (77.31%), Query Frame = 2

Query:  110 LSTVQRRCVVVCEAAPQKVDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAIEIHHGWYAP 466
            L+   RR VV   A  +K DSA KRARQAEKRR+YNK+ KSEI+TR +KV EAL  LKK +    E+++ IEK+I EAYS IDKAVKVGTLHRNTG +RKSRL+RRKK +EIHHGWY P
Sbjct:   56 LAMPSRRPVVFVVAVSKKPDSAAKRARQAEKRRIYNKSHKSEIKTRMRKVFEALGKLKKATSPSPEDLIPIEKLIAEAYSSIDKAVKVGTLHRNTGGHRKSRLSRRKKVVEIHHGWYKP 174

[Close]

BLAST of GT627824 vs. TrEMBL
Match: C5XGP6_SORBI (Putative uncharacterized protein Sb03g031120 OS=Sorghum bicolor GN=Sb03g031120 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 9.428e-33
Identity = 80/129 (62.02%), Postives = 93/129 (72.09%), Query Frame = 2

Query:   83 SVLSAGRLSLSTVQRRCVVVCEAAP-QKVDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAIEIHHGWYAP 466
            S  SAGRL     +R   VVCEA   ++ DS  KR RQ +K R+ N ARK+E+RTR KKVL AL+ L+KK DAQ EEI+ IEK+I EAY  IDK VKVG +HRNTG +RKSRLARRKKAIEI  GWY P
Sbjct:   62 STSSAGRLR----RRGLEVVCEATTGRQPDSVKKRERQNDKHRIRNHARKAEMRTRMKKVLRALEKLRKKPDAQPEEIIEIEKLISEAYKAIDKTVKVGAMHRNTGNHRKSRLARRKKAIEILRGWYVP 186

[Close]

BLAST of GT627824 vs. TrEMBL
Match: B6UG52_MAIZE (Ribosomal protein rpS20 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.231e-32
Identity = 80/129 (62.02%), Postives = 93/129 (72.09%), Query Frame = 2

Query:   83 SVLSAGRLSLSTVQRRCVVVCEAAP-QKVDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAIEIHHGWYAP 466
            SV SAGRL     +R   VVCEA   ++ DS  KR RQ +K R+ N ARK+E+RTR KKVL AL+ L+KK DAQ EEI+ IEK+I EAY  IDK VKVG +HRNT  +RKSRLARRKKAIEI  GWY P
Sbjct:   62 SVSSAGRLR----RRGLEVVCEATTGRRPDSVKKRERQNDKHRIRNHARKAEMRTRMKKVLRALEKLRKKPDAQPEEIIEIEKLIAEAYKAIDKTVKVGAMHRNTANHRKSRLARRKKAIEILRGWYVP 186

[Close]

BLAST of GT627824 vs. TrEMBL
Match: B4FR87_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.608e-32
Identity = 79/129 (61.24%), Postives = 93/129 (72.09%), Query Frame = 2

Query:   83 SVLSAGRLSLSTVQRRCVVVCEAAP-QKVDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAIEIHHGWYAP 466
            S+ SAGRL     +R   VVCEA   ++ DS  KR RQ +K R+ N ARK+E+RTR KKVL AL+ L+KK DAQ EEI+ IEK+I EAY  IDK VKVG +HRNT  +RKSRLARRKKAIEI  GWY P
Sbjct:   62 SISSAGRLR----RRGLEVVCEATTGRRPDSVKKRERQNDKHRIRNHARKAEMRTRMKKVLRALEKLRKKPDAQPEEIIEIEKLIAEAYKAIDKTVKVGAMHRNTANHRKSRLARRKKAIEILRGWYVP 186

[Close]

BLAST of GT627824 vs. SwissProt
Match: RR20_ARATH (30S ribosomal protein S20, chloroplastic OS=Arabidopsis thaliana GN=RPS20 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.147e-42
Identity = 89/127 (70.08%), Postives = 106/127 (83.46%), Query Frame = 2

Query:   92 SAGRLSLSTVQRRCVVVCEAAP--QKVDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAIEIHHGWYAP 466
            S G L +    R+ ++VCEAA   +K DSA KRARQAEKRR+YNK++KSE RTR KKVLEAL+ LKKK+DAQA+EI+++EK+IGEAYS IDKAVKV  LH+NTGA RKSRLARRKKA+EIHHGWY P
Sbjct:   62 STGNLWVQKPMRQ-LIVCEAAAPTKKADSAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALEGLKKKTDAQADEIVTVEKLIGEAYSAIDKAVKVKALHKNTGARRKSRLARRKKAVEIHHGWYVP 187

[Close]

BLAST of GT627824 vs. SwissProt
Match: RS20_ACAM1 (30S ribosomal protein S20 OS=Acaryochloris marina (strain MBIC 11017) GN=rpsT PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.093e-13
Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 2

Query:  164 VDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKA 436
            + SA KR   AE+ RL NKA KS I+T TK+   A+D    KS+   +++ +I+  +   YS IDKAVKVG  HRNTGA +K+ LAR  KA
Sbjct:    4 IKSAKKRILIAERNRLQNKAYKSAIKTFTKRFQAAVD--DYKSNPSDDQLAAIQNEMSVTYSKIDKAVKVGVFHRNTGARKKAGLARILKA 92

[Close]

BLAST of GT627824 vs. SwissProt
Match: RS20_THEEB (30S ribosomal protein S20 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpsT PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.957e-13
Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 2

Query:  164 VDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLAR 424
            + SA KRA+ AE+ RL NKA +S +RT  K  L A+   +  +D   E++  +   +  A+S IDKAVK G LHRNTGA RK+RL R
Sbjct:    4 IKSAAKRAQIAERNRLRNKAYRSAVRTLIKNYLNAIS--QYSTDPTPEKLAEVHHRLNLAFSKIDKAVKRGVLHRNTGARRKARLTR 88

[Close]

BLAST of GT627824 vs. SwissProt
Match: RS20_SYNP2 (30S ribosomal protein S20 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rpsT PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.357e-12
Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = 2

Query:  164 VDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALD--LLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKK 433
            + SA+KR + AE+ RL NK+ KS ++T TKK L+A++       +DAQAE     +K +   YS IDKAVK G  H NT A +K+RLA+  K
Sbjct:    4 IKSAIKRIQTAERNRLRNKSYKSAVKTLTKKCLQAIEQYAAAPSADAQAE----AQKYLSATYSKIDKAVKRGVYHHNTAARKKARLAKEFK 91

[Close]

BLAST of GT627824 vs. SwissProt
Match: RS20_PROM9 (30S ribosomal protein S20 OS=Prochlorococcus marinus (strain MIT 9312) GN=rpsT PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.357e-12
Identity = 38/83 (45.78%), Postives = 57/83 (68.67%), Query Frame = 2

Query:  170 SAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRL 418
            SA KR + AE+ RL NK+ KS +RT TKK LE  +  KK  + + +++  ++  + +A+S+IDKAVK   LH+N GANRKS++
Sbjct:    6 SAKKRIKIAERNRLINKSYKSTVRTLTKKTLENCEKYKKDPNDENKDL--VKTSLNKAFSLIDKAVKKNVLHKNNGANRKSKI 86

[Close]

BLAST of GT627824 vs. SwissProt
Match: RS20_PROMA (30S ribosomal protein S20 OS=Prochlorococcus marinus GN=rpsT PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.315e-12
Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = 2

Query:  167 DSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLAR-RKKAIE 442
            +SA KR + AE+ R+ N+  KS +RT  K+  EA     +K    A++   I+  + +A+S IDKAVK G LHRNTGAN+KSRL    KK IE
Sbjct:    5 NSAKKRIQIAERNRIQNRTYKSAMRTLMKRCFEACGAYSEKPSEDAKK--DIQNSMNDAFSKIDKAVKTGVLHRNTGANQKSRLTSVVKKTIE 95

[Close]

BLAST of GT627824 vs. SwissProt
Match: RS20_PROM0 (30S ribosomal protein S20 OS=Prochlorococcus marinus (strain MIT 9301) GN=rpsT PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.315e-12
Identity = 38/83 (45.78%), Postives = 57/83 (68.67%), Query Frame = 2

Query:  170 SAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRL 418
            SA KR + AE+ RL NK+ KS +RT TKK LE  +  KK+ + + + +++    + +A+S+IDKAVK   LH+N GANRKS++
Sbjct:    6 SAKKRIQIAERNRLINKSYKSTVRTLTKKTLENCEKYKKEPNDENKNLVTTS--LNKAFSLIDKAVKKNVLHKNNGANRKSKI 86

[Close]

BLAST of GT627824 vs. SwissProt
Match: RS20_THET8 (30S ribosomal protein S20 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=rpsT PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.024e-12
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 2

Query:  140 VCEAAPQKVDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAI 439
            + +  P++  SA+KR RQ+ KRRL NKA+KS I+T +KK ++         + +AEE L   K++ +A S+IDKA K  TLH+N  A RKSRL R+ + +
Sbjct:    1 MAQKKPKRNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAIQL------AQEGKAEEAL---KIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQL 91

[Close]

BLAST of GT627824 vs. SwissProt
Match: RS20_PROMS (30S ribosomal protein S20 OS=Prochlorococcus marinus (strain AS9601) GN=rpsT PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.024e-12
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 2

Query:  170 SAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRL 418
            SA KR + AE+ RL NK+ KS +RT TKK LE  +  KK  +   + +  ++  + +A+S+IDKAVK   LH+N GANRKS++
Sbjct:    6 SAKKRIQIAERNRLMNKSYKSTVRTLTKKTLENCEKYKKNPNEDNKNL--VKTSLNKAFSLIDKAVKKNVLHKNNGANRKSKI 86

[Close]

BLAST of GT627824 vs. SwissProt
Match: RS20_PROM4 (30S ribosomal protein S20 OS=Prochlorococcus marinus (strain MIT 9211) GN=rpsT PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.024e-12
Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 2

Query:  167 DSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRL-ARRKKAIE 442
            +SA KR + AE+ RL N++ KS +RT  K+ L A     +K   +A+   ++++ I EA+S IDKAVK G LHRN GAN+KSRL A  KK IE
Sbjct:    5 NSAKKRIQIAERNRLQNRSYKSAMRTLMKRCLTAAGSYLEKPGEEAKA--NLQQNINEAFSKIDKAVKKGVLHRNNGANKKSRLNAAVKKLIE 95

[Close]

BLAST of GT627824 vs. TAIR peptide
Match: AT3G15190.1 (| Symbols: | chloroplast 30S ribosomal protein S20, putative | chr3:5116216-5117412 FORWARD LENGTH=202)

HSP 1 Score: 172.555 bits (436), Expect = 2.129e-43
Identity = 89/127 (70.08%), Postives = 106/127 (83.46%), Query Frame = 2

Query:   92 SAGRLSLSTVQRRCVVVCEAAP--QKVDSAVKRARQAEKRRLYNKARKSEIRTRTKKVLEALDLLKKKSDAQAEEILSIEKMIGEAYSIIDKAVKVGTLHRNTGANRKSRLARRKKAIEIHHGWYAP 466
            S G L +    R+ ++VCEAA   +K DSA KRARQAEKRR+YNK++KSE RTR KKVLEAL+ LKKK+DAQA+EI+++EK+IGEAYS IDKAVKV  LH+NTGA RKSRLARRKKA+EIHHGWY P
Sbjct:   62 STGNLWVQKPMRQ-LIVCEAAAPTKKADSAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALEGLKKKTDAQADEIVTVEKLIGEAYSAIDKAVKVKALHKNTGARRKSRLARRKKAVEIHHGWYVP 187

The following BLAST results are available for this feature:

BLAST of GT627824 vs. TrEMBL
BLAST of GT627824 vs. SwissProt
BLAST of GT627824 vs. TAIR peptide

BLAST of GT627824 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TFB9_SOYBN	3.801e-58	83.45	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SV60_SOYBN	3.330e-54	81.88	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9T1X1_RICCO	4.213e-49	74.10	30S ribosomal protein S20, putative OS=Ricinus com...	[more]
B9N1D8_POPTR	1.147e-46	69.57	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7L400_ARALY	9.406e-41	69.29	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
A9NV81_PICSI	1.076e-36	66.39	Putative uncharacterized protein OS=Picea sitchens...	[more]
A9NTN6_PICSI	3.131e-36	65.55	Putative uncharacterized protein OS=Picea sitchens...	[more]
C5XGP6_SORBI	9.428e-33	62.02	Putative uncharacterized protein Sb03g031120 OS=So...	[more]
B6UG52_MAIZE	1.231e-32	62.02	Ribosomal protein rpS20 OS=Zea mays PE=2 SV=1	[more]
B4FR87_MAIZE	1.608e-32	61.24	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of GT627824 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RR20_ARATH	2.147e-42	70.08	30S ribosomal protein S20, chloroplastic OS=Arabid...	[more]
RS20_ACAM1	6.093e-13	48.35	30S ribosomal protein S20 OS=Acaryochloris marina ...	[more]
RS20_THEEB	7.957e-13	47.13	30S ribosomal protein S20 OS=Thermosynechococcus e...	[more]
RS20_SYNP2	1.357e-12	45.65	30S ribosomal protein S20 OS=Synechococcus sp. (st...	[more]
RS20_PROM9	1.357e-12	45.78	30S ribosomal protein S20 OS=Prochlorococcus marin...	[more]
RS20_PROMA	2.315e-12	46.24	30S ribosomal protein S20 OS=Prochlorococcus marin...	[more]
RS20_PROM0	2.315e-12	45.78	30S ribosomal protein S20 OS=Prochlorococcus marin...	[more]
RS20_THET8	3.024e-12	43.00	30S ribosomal protein S20 OS=Thermus thermophilus ...	[more]
RS20_PROMS	3.024e-12	45.78	30S ribosomal protein S20 OS=Prochlorococcus marin...	[more]
RS20_PROM4	3.024e-12	48.39	30S ribosomal protein S20 OS=Prochlorococcus marin...	[more]

BLAST of GT627824 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G15190.1	2.129e-43	70.08	\| Symbols: \| chloroplast 30S ribosomal protein S2...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002583	Ribosomal protein S20	GENE3D	1.20.58.110	no description	coord: 56..154 score: 1.3
IPR002583	Ribosomal protein S20	HAMAP	MF_00500	Ribosomal_S20	coord: 50..145 score: 15
IPR002583	Ribosomal protein S20	PFAM	PF01649	Ribosomal_S20p	coord: 55..142 score: 7.2
IPR002583	Ribosomal protein S20	TIGRFAMs	TIGR00029	S20: ribosomal protein S20	coord: 54..147 score: 1
IPR002583	Ribosomal protein S20	SUPERFAMILY	46992	Ribosomal protein S20	coord: 54..161 score: 5
None	No IPR available	SEG	seg	seg	coord: 5..22 score
None	No IPR available	SEG	seg	seg	coord: 3..16 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT627824 ID=GT627824; Name=GT627824; organism=Lens culinaris; type=EST; length=755bp
CAAAATGAGAGGTCTTACCCTAACTTCATCTTCTTCAACTTCAAATTCCG
TTTCTCTATCTTTCTCCCGCAACATTTCTCACTCCGTCCTTTCAGCAGGT
AGATTGTCGTTGAGTACAGTACAGAGGCGTTGCGTTGTAGTTTGCGAGGC
GGCTCCTCAAAAGGTTGATTCTGCAGTTAAGAGAGCTCGACAAGCCGAGA
AACGTCGCCTTTATAACAAAGCTCGCAAATCAGAGATCAGAACACGCACC
AAGAAGGTTTTGGAAGCACTGGATTTGCTCAAAAAGAAATCTGATGCACA
AGCGGAAGAAATCCTCTCAATTGAGAAGATGATTGGAGAGGCATACTCTA
TAATTGACAAAGCGGTGAAAGTGGGCACATTGCATAGAAACACTGGAGCA
AACCGCAAGTCTCGGCTTGCTAGAAGAAAGAAGGCAATAGAAATTCATCA
TGGTTGGTATGCTCCTGTCCCTCAAGAAAGTGCCTGAAACAATCCTTGTT
AATTCGTTTTTATGTACCAAGGTGAGAACTTAAGACATATTTCTCTCACT
GCTCAAATCTTGTATTTTAGTTTTTTTTACTTCAGTTCAAATTGACTTAG
TGTACCATACCATCATCATGTAGAGGCTCTCCATTTGATGTTAGCATCAT
CTTCGAAATTAGCAATTGTTGTATTCTTCCTTTATTGTTATATTGCATAG
CATGCCTCCTTAACTTAATAATAGTTGCTCTGTGATTTAAACTTGATTGT
CATTG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR002583	Ribosomal_S20

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