GT626305
EST Overview
Unigenes
This EST is part of the following unigenes:
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT626305 vs. TrEMBL
Match: B9RIZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1752370 PE=4 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.606e-22 Identity = 66/138 (47.83%), Postives = 80/138 (57.97%), Query Frame = 2 Query: 5 SLLQESETSKGSLIAPGLFRGLVPSASTVCXXXXXXXXXXXXXXXXXXXXXMETPARRHHLIPKEVLVPLSMKSPS-YSNFLAANKPAQDRNLHSITGDCSGASKSTSFDL--PEGRVHGGDLMLFFGGNLKNALDGI 409 S++ E ++KGSLI PGLF+GLV +AS + P +R HLIP +VLVP SMKS S YS+FL A K + RN +S S+ TSFD PEGRVHGG LM FGGNLKNA+DGI Sbjct: 511 SMVLEQGSNKGSLIGPGLFQGLVSAASNAGSSIDNNYSSSGISAVSDCTDSLGKPTKRQHLIPAQVLVPPSMKSSSSYSSFLNAEKQEEGRNEYS--AGAGSTSRVTSFDYMAPEGRVHGGGLMSLFGGNLKNAIDGI 646
BLAST of GT626305 vs. TrEMBL
Match: B9GZS4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_712220 PE=4 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.811e-18 Identity = 56/136 (41.18%), Postives = 79/136 (58.09%), Query Frame = 2 Query: 5 SLLQESETSKGSLIAPGLFRGLVPSASTVCXXXXXXXXXXXXXXXXXXXXXMETPARRHHLIPKEVLVPLSMKSPS-YSNFLAANKPAQDRNLHSITGDCSGASKSTSFDLPEGRVHGGDLMLFFGGNLKNALDGI 409 S++QE E ++ LI PGLF GLV +AST +E PA+R HLIP +VLVP SMK+ S +++F+ A+ + N + T SG K+ + +PEGRVHGG LM FGGNL+NA++ + Sbjct: 510 SMVQEREANRTGLIRPGLFHGLVSAASTAGSSIDNNHSYSGVSAVSDCSDSLEKPAKRLHLIPPQVLVPHSMKATSSFTSFMNADNLEEGTNGYGAT---SGGKKNFDYLVPEGRVHGGGLMSLFGGNLRNAINEV 642
BLAST of GT626305 vs. TrEMBL
Match: B9GF89_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_640805 PE=4 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.811e-18 Identity = 56/136 (41.18%), Postives = 75/136 (55.15%), Query Frame = 2 Query: 5 SLLQESETSKGSLIAPGLFRGLVPSASTVCXXXXXXXXXXXXXXXXXXXXXMETPARRHHLIPKEVLVPLSMK-SPSYSNFLAANKPAQDRNLHSITGDCSGASKSTSFDLPEGRVHGGDLMLFFGGNLKNALDGI 409 S++QE + +K LI PGLF GLV ++S +E PA+R HLIP +VLVPLSMK S S + F+ + N + G +G K + +PEGRVHGG LM FGGNLKN++DG+ Sbjct: 510 SMVQERKANKTGLIGPGLFHGLVSASSVAGSSIDTNHSYSGVSAVSDSIDSLEKPAKRQHLIPAQVLVPLSMKVSSSCTGFMNTENLEEGTNGY---GASNGGIKGCDYLVPEGRVHGGALMSLFGGNLKNSIDGV 642
BLAST of GT626305 vs. TrEMBL
Match: A5B6J0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015279 PE=4 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.874e-15 Identity = 57/140 (40.71%), Postives = 76/140 (54.29%), Query Frame = 2 Query: 5 SLLQESETSKGSLIAPGLFRGLVPSASTVCXXXXXXXXXXXXXXXXXXXXXMETPARR--HHLIPKEVLVPLSMK-SPSYSNFLAANKPAQDRNLHSITG-DCSGASKSTSFD-----LPEGRVHGGDLMLFFGGNLKNA 397 SL+QE ET KG +I PGLF GLVP+A++ +E ++R LIP +VLVPLSMK S SYS ++A + + + I G + + + SF+ +PEGRVHGG LM GGNLKNA Sbjct: 510 SLVQERETKKGGMIGPGLFHGLVPTATSTGGSSFDNNSSSGVSVISDCINSLEKASKRRQQQLIPPQVLVPLSMKSSSSYSRLVSAERQEEASHGGGIGGSNSNNTAGGKSFNMMMMMIPEGRVHGGGLMSMLGGNLKNA 649
BLAST of GT626305 vs. TrEMBL
Match: D7TR30_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_99.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00038733001 PE=4 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.029e-14 Identity = 52/137 (37.96%), Postives = 72/137 (52.55%), Query Frame = 2 Query: 5 SLLQESETSKGSLIAPGLFRGLVPSASTVCXXXXXXXXXXXXXXXXXXXXXMETPARR--HHLIPKEVLVPLSMKSPSYSNFLAANKPAQDRNLHSITGDCSGASKSTSFDLPEGRVHGGDLMLFFGGNLKNALDGI 409 SL+QE ET KG +I PGLF GLVP+A++ +E ++R LIP +VLVPLSMKS S++ ++N A ++ + + +PEGRVHGG LM GGNLKNA + + Sbjct: 339 SLVQERETKKGGMIGPGLFHGLVPTATSTGGSSFDNNSSSGVSVISDCINSLEKASKRRQQQLIPPQVLVPLSMKSS--SSYSSSNNTAGGKSFNMM-----------MMMIPEGRVHGGGLMSMLGGNLKNACNEV 462
BLAST of GT626305 vs. TAIR peptide
Match: AT5G64550.1 (| Symbols: | loricrin-related | chr5:25801794-25803698 REVERSE LENGTH=634) HSP 1 Score: 60.8474 bits (146), Expect = 7.576e-10 Identity = 51/148 (34.46%), Postives = 65/148 (43.92%), Query Frame = 2 Query: 5 SLLQESETSKGSLIAPGLFRGLVPS-------ASTVCXXXXXXXXXXXXXXXXXXXXXMETPARRHH-------LIPKEVLVPLSMKSPSYSNFLAANKPAQDRNLHSITGDCSGASKSTSFD--LPEGRVHGGDLMLFFGGNLKNAL 400 S+ Q+ SK LI PGLFRGLV + A+T P H +IP +VLVP SMKS S+SN +P + N +S SG++ FD +PE RVHGG LM GN+K L Sbjct: 494 SMSQDKAGSKVGLIGPGLFRGLVSTSLQTTTTATTTTTTTDHSQSGVSAVSDCMDSIDRPLPPLHHQPEKRQKLMIPMQVLVPPSMKSLSFSN---TERPDIETNNNS-----SGSNGRNIFDFMIPEERVHGGGLMSLLNGNMKQTL 633 The following BLAST results are available for this feature:
BLAST of GT626305 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 5
BLAST of GT626305 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT626305 ID=GT626305; Name=GT626305; organism=Lens culinaris; type=EST; length=678bpback to top |