FG535707

EST Overview


Name	FG535707
Unique Name	FG535707
Type	EST
Organism	Pisum sativum (pea)
Sequence length	228

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v2	Pisum sativum unigene v2	EST
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Libraries


Library Name	Type
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTs	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Pisum sativum unigene v2	2011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Trembl	2011-04-27
Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins	2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides	2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins	2011-04-21
InterProScan analysis for Pisum sativum unigene v2	2011-04-27
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG535707 vs. TrEMBL
Match: B7FHX6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.183e-9
Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 1

Query:  100 MVSPENTDWLFDYALIDDIPVS-DGSSAFAWPPSHPLNVCVDMD 228
            MVSPENT+WLFDY LID+IPVS DGS AF WPP H  N  ++MD
Sbjct:    1 MVSPENTNWLFDYPLIDEIPVSVDGSFAFTWPPPHLSNGGIEMD 44

[Close]

BLAST of FG535707 vs. TrEMBL
Match: C6TIB3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.208e-7
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 1

Query:  100 MVSPENTDWLFDYALIDD-IPVSDGS-----SAFAWPPSHPLNVCVDMD 228
            MVSPEN++WLFDY LIDD IPV D S     SAF+WPP  P NV V++D
Sbjct:    1 MVSPENSNWLFDYPLIDDVIPVGDASFSVSASAFSWPPP-PANVSVEID 48

[Close]

BLAST of FG535707 vs. TrEMBL
Match: B7FHX6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.480e-9
Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 1

Query:  100 MVSPENTDWLFDYALIDDIPVS-DGSSAFAWPPSHPLNVCVDMD 228
            MVSPENT+WLFDY LID+IPVS DGS AF WPP H  N  ++MD
Sbjct:    1 MVSPENTNWLFDYPLIDEIPVSVDGSFAFTWPPPHLSNGGIEMD 44

[Close]

BLAST of FG535707 vs. TrEMBL
Match: C6TIB3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 5.262e-7
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 1

Query:  100 MVSPENTDWLFDYALIDD-IPVSDGS-----SAFAWPPSHPLNVCVDMD 228
            MVSPEN++WLFDY LIDD IPV D S     SAF+WPP  P NV V++D
Sbjct:    1 MVSPENSNWLFDYPLIDDVIPVGDASFSVSASAFSWPPP-PANVSVEID 48

[Close]

BLAST of FG535707 vs. Lotus protein
Match: LjSGA_023620.0.1 (+ phase: 0 /est)

HSP 1 Score: 54.6842 bits (130), Expect = 9.254e-9
Identity = 31/45 (68.89%), Postives = 32/45 (71.11%), Query Frame = 1

Query:  100 MVSPENTDWLFDYALI-DDIPVSDGS-----SAFAW-PPSHPLNV 213
            MVSPENT+WLFDY LI DDIP SDGS     SAF W PP  P NV
Sbjct:   17 MVSPENTNWLFDYGLIDDDIPGSDGSFTLSASAFNWPPPPQPSNV 61

[Close]

BLAST of FG535707 vs. Soybean peptides
Match: Glyma12g16560.4|PACid:16287681 ()

HSP 1 Score: 59.6918 bits (143), Expect = 6.693e-10
Identity = 32/51 (62.75%), Postives = 35/51 (68.63%), Query Frame = 1

Query:  100 MVSPENTDWLFDYALIDDIPVSD-----GSSAFAWPPS---HPLNVCVDMD 228
            MVS ENT+WLFDY LIDDIPV D      SSAF WPP+    P NV VD+D
Sbjct:    1 MVSRENTNWLFDYGLIDDIPVPDATFGVNSSAFTWPPNALDAPSNVGVDID 51

[Close]

BLAST of FG535707 vs. Soybean peptides
Match: Glyma12g16560.3|PACid:16287680 ()

HSP 1 Score: 59.6918 bits (143), Expect = 6.693e-10
Identity = 32/51 (62.75%), Postives = 35/51 (68.63%), Query Frame = 1

Query:  100 MVSPENTDWLFDYALIDDIPVSD-----GSSAFAWPPS---HPLNVCVDMD 228
            MVS ENT+WLFDY LIDDIPV D      SSAF WPP+    P NV VD+D
Sbjct:    1 MVSRENTNWLFDYGLIDDIPVPDATFGVNSSAFTWPPNALDAPSNVGVDID 51

[Close]

BLAST of FG535707 vs. Soybean peptides
Match: Glyma12g16560.1|PACid:16287678 ()

HSP 1 Score: 59.6918 bits (143), Expect = 6.693e-10
Identity = 32/51 (62.75%), Postives = 35/51 (68.63%), Query Frame = 1

Query:  100 MVSPENTDWLFDYALIDDIPVSD-----GSSAFAWPPS---HPLNVCVDMD 228
            MVS ENT+WLFDY LIDDIPV D      SSAF WPP+    P NV VD+D
Sbjct:    1 MVSRENTNWLFDYGLIDDIPVPDATFGVNSSAFTWPPNALDAPSNVGVDID 51

[Close]

BLAST of FG535707 vs. Soybean peptides
Match: Glyma12g34300.1|PACid:16288850 ()

HSP 1 Score: 57.7658 bits (138), Expect = 2.543e-9
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 1

Query:  100 MVSPENTDWLFDYALIDD-IPVSDGS-----SAFAWPPSHPLNVCVDMD 228
            MVSPEN++WLFDY LIDD IPV D S     SAF+WPP  P NV V++D
Sbjct:    1 MVSPENSNWLFDYPLIDDVIPVGDASFSVSASAFSWPPP-PANVSVEID 48

[Close]

BLAST of FG535707 vs. Soybean peptides
Match: Glyma13g36260.1|PACid:16292803 ()

HSP 1 Score: 55.8398 bits (133), Expect = 9.665e-9
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 1

Query:  100 MVSPENTDWLFDYALIDD--IPVSDGS-----SAFAWPPSHPLNVCVDMD 228
            MVSPEN++WLFDY LIDD  IPV D S     S F+WPP  P NV V++D
Sbjct:    1 MVSPENSNWLFDYPLIDDDVIPVGDSSFAVSASTFSWPPP-PANVSVEID 49

[Close]

BLAST of FG535707 vs. Soybean peptides
Match: Glyma06g41620.1|PACid:16264864 ()

HSP 1 Score: 55.0694 bits (131), Expect = 1.649e-8
Identity = 30/51 (58.82%), Postives = 34/51 (66.67%), Query Frame = 1

Query:  100 MVSPENTDWLFDYALIDDIPVSD-----GSSAFAWPP---SHPLNVCVDMD 228
            MVS ENT+WLFDY LIDDIPV D      SSAF WPP   +   NV V++D
Sbjct:    1 MVSRENTNWLFDYGLIDDIPVPDATFGVNSSAFTWPPNALNASSNVGVEID 51

[Close]

BLAST of FG535707 vs. Medicago proteins
Match: IMGA|Medtr2g082640.1 (Transcription factor ILR3 (AHRD V1 **** Q9FH37); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH chr02_pseudomolecule_IMGAG_V3.5 25000150-25002733 F EGN_Mt100125 20100825)

HSP 1 Score: 66.2402 bits (160), Expect = 4.535e-12
Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 1

Query:  100 MVSPENTDWLFDYALIDDIPVS-DGSSAFAWPPSHPLNVCVDMD 228
            MVSPENT+WLFDY LID+IPVS DGS AF WPP H  N  ++MD
Sbjct:    1 MVSPENTNWLFDYPLIDEIPVSVDGSFAFTWPPPHLSNGGIEMD 44

The following BLAST results are available for this feature:

BLAST of FG535707 vs. TrEMBL
BLAST of FG535707 vs. TrEMBL
BLAST of FG535707 vs. Lotus protein
BLAST of FG535707 vs. Soybean peptides
BLAST of FG535707 vs. Medicago proteins

BLAST of FG535707 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2


Match Name	E-value	Identity	Description
B7FHX6_MEDTR	1.183e-9	70.45	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6TIB3_SOYBN	4.208e-7	63.27	Putative uncharacterized protein OS=Glycine max PE...	[more]

BLAST of FG535707 vs. TrEMBL
Analysis Date: 2011-04-27 (Homology Analysis: Pisum sativum unigene v2 vs Trembl)
Total hits: 2


Match Name	E-value	Identity	Description
B7FHX6_MEDTR	1.480e-9	70.45	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6TIB3_SOYBN	5.262e-7	63.27	Putative uncharacterized protein OS=Glycine max PE...	[more]

BLAST of FG535707 vs. Lotus protein
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins)
Total hits: 1


Match Name	E-value	Identity	Description
LjSGA_023620.0.1	9.254e-9	68.89	+ phase: 0 /est	[more]

BLAST of FG535707 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 6


Match Name	E-value	Identity
Glyma12g16560.4\|PACid:16287681	6.693e-10	62.75	[more]
Glyma12g16560.3\|PACid:16287680	6.693e-10	62.75	[more]
Glyma12g16560.1\|PACid:16287678	6.693e-10	62.75	[more]
Glyma12g34300.1\|PACid:16288850	2.543e-9	63.27	[more]
Glyma13g36260.1\|PACid:16292803	9.665e-9	60.00	[more]
Glyma06g41620.1\|PACid:16264864	1.649e-8	58.82	[more]

BLAST of FG535707 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 1


Match Name	E-value	Identity	Description
IMGA\|Medtr2g082640.1	4.535e-12	70.45	Transcription factor ILR3 (AHRD V1 **** Q9FH37); c...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 7..19 score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 7..19 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v2
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG535707 ID=FG535707; Name=FG535707; organism=Pisum sativum; type=EST; length=228bp
GACCTAATTTGATCTATAAATACAAAATAAAACAATAATCACTTATTTAT
AAAAAAATTAGAAACAAAATTATCACCGCCGGGAAAGTCTCACCGAACAA
TGGTTTCCCCGGAAAACACCGATTGGCTTTTCGATTATGCTTTGATTGAC
GATATTCCCGTCTCCGATGGTTCCTCGGCCTTCGCCTGGCCCCCATCACA
TCCTCTCAATGTCTGTGTTGATATGGAT

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