GH720676

EST Overview
NameGH720676
Unique NameGH720676
TypeEST
OrganismPisum sativum (pea)
Sequence length245
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Libraries
Library NameType
LIBEST_024272 BACIcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of GH720676 vs. TrEMBL
Match: C6T545_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.203e-17
Identity = 44/56 (78.57%), Postives = 50/56 (89.29%), Query Frame = -3
Query:   61 VLDMKLDTKPGYVETFAIGVVSGVALNGIGAILPRIISPIAQIWNSVTTATKSAPQ 228
            VLDMKLD+KPGYVETFAIG+ SG AL GIGAI+P II+P+ QIWNSV TATKS+PQ
Sbjct:   84 VLDMKLDSKPGYVETFAIGLASGAALKGIGAIVPHIIAPLFQIWNSVFTATKSSPQ 139          
BLAST of GH720676 vs. TrEMBL
Match: B9RHT7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1573510 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.289e-11
Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = -3
Query:   64 VLDMKLDTKPGYVETFAIGVVSGVALNGIGAILPRIISPIAQIWNSVTTATKSAP 228
            +LDMK+D+KPGY ETFAIGV SG A  G   + P ++  ++QIW +VTTATK  P
Sbjct:   88 ILDMKIDSKPGYFETFAIGVASGAAFRGFETVWPHVLGGVSQIWTAVTTATKPPP 142          
BLAST of GH720676 vs. TrEMBL
Match: B9HV08_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_725226 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.861e-10
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = -3
Query:   73 VLDMKLDTKPGYVETFAIGVVSGVALNGIGAILPRIISPIAQIWNSVTTATK 228
            V+DMKLD KPGY ETFAIGV S  A  G+  + P ++  IAQIWN+V T TK
Sbjct:   91 VVDMKLDLKPGYAETFAIGVASASAFRGVETVWPHVVGGIAQIWNAVRTVTK 142          
BLAST of GH720676 vs. TrEMBL
Match: Q6NQG3_ARATH (At1g16790 OS=Arabidopsis thaliana GN=At1g16790 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.057e-9
Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = -3
Query:   76 VLDMKLDTKPGYVETFAIGVVSGVALNGIGAILPRIISPIAQIWNSVTTAT 228
            V+D KL+TKPGYVETFA+G+ SG  LNGI A+ P +   I QIW++V   T
Sbjct:   88 VVDAKLETKPGYVETFALGLASGATLNGISAVWPHVTRGIGQIWSAVRIGT 138          
BLAST of GH720676 vs. TAIR peptide
Match: AT1G16790.1 (| Symbols: | ribosomal protein-related | chr1:5744638-5745072 FORWARD LENGTH=144)

HSP 1 Score: 65.4698 bits (158), Expect = 7.973e-12
Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = -3
Query:   76 VLDMKLDTKPGYVETFAIGVVSGVALNGIGAILPRIISPIAQIWNSVTTAT 228
            V+D KL+TKPGYVETFA+G+ SG  LNGI A+ P +   I QIW++V   T
Sbjct:   88 VVDAKLETKPGYVETFALGLASGATLNGISAVWPHVTRGIGQIWSAVRIGT 138          
The following BLAST results are available for this feature:
BLAST of GH720676 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
C6T545_SOYBN1.203e-1778.57Putative uncharacterized protein OS=Glycine max PE... [more]
B9RHT7_RICCO1.289e-1156.36Putative uncharacterized protein OS=Ricinus commun... [more]
B9HV08_POPTR1.861e-1059.62Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q6NQG3_ARATH2.057e-956.86At1g16790 OS=Arabidopsis thaliana GN=At1g16790 PE=... [more]
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BLAST of GH720676 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G16790.17.973e-1256.86| Symbols: | ribosomal protein-related | chr1:574... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 3..29
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GH720676 ID=GH720676; Name=GH720676; organism=Pisum sativum; type=EST; length=245bp
TCGAGCGGCCGCCCNGGGCAGGTACATACATACAAAACTAAAACTGAATC
AAAAATGTCATTGAGGTGCAGATTTAGTGGCCGTAGTAACAGAATTCCAA
ATCTGAGCAATAGGAGAAATAATACGAGGCAATATAGCCCCAATTCCATT
CAGAGCTACACCAGAAACAACACCAATTGCAAACGTCTCAACATAACCAG
GCTTAGTATCCAACTTCATGTCAAGTACCTCGGCCGCGACCACGC
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